Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
VimP20152 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
VimP20152 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC11.47□□□□□ -0.57
VimP20152 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VimP20152 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VimP20152 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VimP20152 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VimP20152 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC11.47□□□□□ -0.57
VimP20152 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VimP20152 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.47□□□□□ -0.57
VimP20152 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
VimP20152 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.47□□□□□ -0.57
VimP20152 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VimP20152 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VimP20152 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
VimP20152 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VimP20152 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VimP20152 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
VimP20152 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VimP20152 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.47□□□□□ -0.57
VimP20152 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.47□□□□□ -0.57
VimP20152 Gm11573-201ENSMUST00000119956 394 ntBASIC11.47□□□□□ -0.57
VimP20152 Gm14057-201ENSMUST00000120631 482 ntBASIC11.47□□□□□ -0.57
VimP20152 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.47□□□□□ -0.57
VimP20152 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VimP20152 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VimP20152 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.47□□□□□ -0.57
VimP20152 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.47□□□□□ -0.57
VimP20152 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VimP20152 Gm19287-201ENSMUST00000203190 358 ntBASIC11.47□□□□□ -0.57
VimP20152 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.47□□□□□ -0.57
VimP20152 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC11.47□□□□□ -0.57
VimP20152 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VimP20152 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.47□□□□□ -0.57
VimP20152 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.47□□□□□ -0.57
VimP20152 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VimP20152 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VimP20152 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
VimP20152 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
VimP20152 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
VimP20152 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VimP20152 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VimP20152 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC11.47□□□□□ -0.57
VimP20152 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VimP20152 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
VimP20152 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
VimP20152 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VimP20152 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VimP20152 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
VimP20152 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC11.47□□□□□ -0.57
VimP20152 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VimP20152 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VimP20152 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC11.47□□□□□ -0.57
VimP20152 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
VimP20152 AC107453.4-201ENSMUST00000227068 1817 ntBASIC11.46□□□□□ -0.57
VimP20152 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
VimP20152 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
VimP20152 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
VimP20152 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VimP20152 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VimP20152 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
VimP20152 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
VimP20152 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
VimP20152 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC11.46□□□□□ -0.57
VimP20152 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
VimP20152 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VimP20152 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.46□□□□□ -0.57
VimP20152 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VimP20152 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
VimP20152 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
VimP20152 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
VimP20152 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.46□□□□□ -0.57
VimP20152 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
VimP20152 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VimP20152 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
VimP20152 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.46□□□□□ -0.57
VimP20152 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.46□□□□□ -0.57
VimP20152 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
VimP20152 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.46□□□□□ -0.57
VimP20152 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VimP20152 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
VimP20152 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
VimP20152 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.46□□□□□ -0.57
VimP20152 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
VimP20152 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
VimP20152 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
VimP20152 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
VimP20152 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC11.46□□□□□ -0.58
VimP20152 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
VimP20152 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
VimP20152 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
VimP20152 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.46□□□□□ -0.58
VimP20152 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
VimP20152 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
VimP20152 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
VimP20152 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
VimP20152 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VimP20152 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VimP20152 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
VimP20152 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms