Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chaf1aQ9QWF0 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chaf1aQ9QWF0 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Chaf1aQ9QWF0 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Chaf1aQ9QWF0 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chaf1aQ9QWF0 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.78□□□□□ -0.36
Chaf1aQ9QWF0 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.78□□□□□ -0.36
Chaf1aQ9QWF0 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
Chaf1aQ9QWF0 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chaf1aQ9QWF0 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chaf1aQ9QWF0 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Chaf1aQ9QWF0 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chaf1aQ9QWF0 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Chaf1aQ9QWF0 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.77□□□□□ -0.36
Chaf1aQ9QWF0 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chaf1aQ9QWF0 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chaf1aQ9QWF0 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Chaf1aQ9QWF0 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chaf1aQ9QWF0 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Gm11660-201ENSMUST00000120955 412 ntBASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Gm5616-201ENSMUST00000165252 384 ntBASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Gm8741-201ENSMUST00000174736 384 ntBASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Gm28686-201ENSMUST00000187404 609 ntBASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Gm7783-201ENSMUST00000204795 781 ntBASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Gm8913-201ENSMUST00000209491 641 ntBASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Gm13097-201ENSMUST00000210722 397 ntBASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chaf1aQ9QWF0 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Gm13350-201ENSMUST00000120519 479 ntBASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1aQ9QWF0 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chaf1aQ9QWF0 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms