Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps53Q8CCB4 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Vps53Q8CCB4 Gm8492-201ENSMUST00000182375 987 ntBASIC13.3□□□□□ -0.28
Vps53Q8CCB4 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.3□□□□□ -0.28
Vps53Q8CCB4 Gm5542-201ENSMUST00000195485 1089 ntBASIC13.3□□□□□ -0.28
Vps53Q8CCB4 Gm43002-201ENSMUST00000200310 155 ntBASIC13.3□□□□□ -0.28
Vps53Q8CCB4 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps53Q8CCB4 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC13.3□□□□□ -0.28
Vps53Q8CCB4 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps53Q8CCB4 Gm8420-201ENSMUST00000097103 598 ntBASIC13.3□□□□□ -0.28
Vps53Q8CCB4 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps53Q8CCB4 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps53Q8CCB4 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC13.3□□□□□ -0.28
Vps53Q8CCB4 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.3□□□□□ -0.28
Vps53Q8CCB4 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps53Q8CCB4 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Vps53Q8CCB4 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps53Q8CCB4 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps53Q8CCB4 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps53Q8CCB4 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC13.3□□□□□ -0.28
Vps53Q8CCB4 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps53Q8CCB4 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Vps53Q8CCB4 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps53Q8CCB4 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps53Q8CCB4 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps53Q8CCB4 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps53Q8CCB4 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Vps53Q8CCB4 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps53Q8CCB4 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Vps53Q8CCB4 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps53Q8CCB4 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC13.29□□□□□ -0.28
Vps53Q8CCB4 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC13.29□□□□□ -0.28
Vps53Q8CCB4 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps53Q8CCB4 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.29□□□□□ -0.28
Vps53Q8CCB4 Gm15595-201ENSMUST00000120840 961 ntBASIC13.29□□□□□ -0.28
Vps53Q8CCB4 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Vps53Q8CCB4 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps53Q8CCB4 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps53Q8CCB4 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC13.29□□□□□ -0.28
Vps53Q8CCB4 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC13.29□□□□□ -0.28
Vps53Q8CCB4 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.29□□□□□ -0.28
Vps53Q8CCB4 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps53Q8CCB4 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps53Q8CCB4 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps53Q8CCB4 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps53Q8CCB4 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps53Q8CCB4 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps53Q8CCB4 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps53Q8CCB4 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC13.29□□□□□ -0.28
Vps53Q8CCB4 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps53Q8CCB4 AC123738.2-201ENSMUST00000223791 1899 ntBASIC13.29□□□□□ -0.28
Vps53Q8CCB4 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Vps53Q8CCB4 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Vps53Q8CCB4 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps53Q8CCB4 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps53Q8CCB4 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps53Q8CCB4 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps53Q8CCB4 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Vps53Q8CCB4 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps53Q8CCB4 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps53Q8CCB4 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.28□□□□□ -0.28
Vps53Q8CCB4 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps53Q8CCB4 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps53Q8CCB4 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps53Q8CCB4 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vps53Q8CCB4 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps53Q8CCB4 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps53Q8CCB4 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vps53Q8CCB4 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps53Q8CCB4 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vps53Q8CCB4 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Vps53Q8CCB4 Gm15352-201ENSMUST00000118696 270 ntBASIC13.28□□□□□ -0.28
Vps53Q8CCB4 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC13.28□□□□□ -0.28
Vps53Q8CCB4 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps53Q8CCB4 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps53Q8CCB4 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Vps53Q8CCB4 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vps53Q8CCB4 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.28□□□□□ -0.28
Vps53Q8CCB4 Gm45575-201ENSMUST00000210283 548 ntBASIC13.28□□□□□ -0.28
Vps53Q8CCB4 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC13.28□□□□□ -0.28
Vps53Q8CCB4 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC13.28□□□□□ -0.28
Vps53Q8CCB4 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps53Q8CCB4 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.28□□□□□ -0.28
Vps53Q8CCB4 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vps53Q8CCB4 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps53Q8CCB4 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Vps53Q8CCB4 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps53Q8CCB4 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps53Q8CCB4 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vps53Q8CCB4 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Vps53Q8CCB4 AC158355.1-201ENSMUST00000215895 1705 ntBASIC13.27□□□□□ -0.28
Vps53Q8CCB4 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vps53Q8CCB4 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.27□□□□□ -0.28
Vps53Q8CCB4 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC13.27□□□□□ -0.28
Vps53Q8CCB4 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.27□□□□□ -0.28
Vps53Q8CCB4 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vps53Q8CCB4 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vps53Q8CCB4 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vps53Q8CCB4 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
Vps53Q8CCB4 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms