Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Ralgps2-202ENSMUST00000063199 2947 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 R3hdm2-218ENSMUST00000170336 3639 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Speer4b-201ENSMUST00000053257 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Cd247-206ENSMUST00000161971 2713 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 AC156802.2-203ENSMUST00000226032 1906 ntBASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 P3h1-202ENSMUST00000081606 2820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Gm14999-201ENSMUST00000121039 624 ntBASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Gm8602-201ENSMUST00000184045 607 ntBASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Gm45784-201ENSMUST00000188360 142 ntBASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Gm6266-201ENSMUST00000203844 806 ntBASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 AA474408-201ENSMUST00000098110 3339 ntBASIC10.78□□□□□ -0.68
Rnf220Q6PDX6 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rnf220Q6PDX6 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.77□□□□□ -0.68
Rnf220Q6PDX6 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rnf220Q6PDX6 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Rnf220Q6PDX6 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rnf220Q6PDX6 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC10.77□□□□□ -0.68
Rnf220Q6PDX6 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.68
Rnf220Q6PDX6 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rnf220Q6PDX6 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Dcun1d4-201ENSMUST00000063882 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Gm23912-201ENSMUST00000104687 87 ntBASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Gm14660-201ENSMUST00000119809 575 ntBASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Gm27731-201ENSMUST00000185192 107 ntBASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Gm19680-201ENSMUST00000095050 1513 ntBASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms