Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VcanQ62059 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
VcanQ62059 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
VcanQ62059 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VcanQ62059 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
VcanQ62059 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
VcanQ62059 E030025P04Rik-201ENSMUST00000106710 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VcanQ62059 Gm9630-201ENSMUST00000178304 885 ntBASIC10.37□□□□□ -0.75
VcanQ62059 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VcanQ62059 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC10.37□□□□□ -0.75
VcanQ62059 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
VcanQ62059 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
VcanQ62059 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VcanQ62059 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VcanQ62059 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VcanQ62059 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VcanQ62059 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
VcanQ62059 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VcanQ62059 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VcanQ62059 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VcanQ62059 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
VcanQ62059 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
VcanQ62059 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
VcanQ62059 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VcanQ62059 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VcanQ62059 Fhl3-202ENSMUST00000106199 1139 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
VcanQ62059 Gm15650-201ENSMUST00000135451 770 ntTSL 3 BASIC10.37□□□□□ -0.75
VcanQ62059 Gm23916-201ENSMUST00000158484 399 ntBASIC10.37□□□□□ -0.75
VcanQ62059 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VcanQ62059 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.37□□□□□ -0.75
VcanQ62059 AC154506.2-201ENSMUST00000225481 1276 ntBASIC10.37□□□□□ -0.75
VcanQ62059 CT009713.2-201ENSMUST00000225532 1149 ntBASIC10.37□□□□□ -0.75
VcanQ62059 AC174647.1-201ENSMUST00000227419 1271 ntBASIC10.37□□□□□ -0.75
VcanQ62059 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VcanQ62059 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
VcanQ62059 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VcanQ62059 Gm9244-201ENSMUST00000056767 2129 ntBASIC10.37□□□□□ -0.75
VcanQ62059 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.36□□□□□ -0.75
VcanQ62059 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.36□□□□□ -0.75
VcanQ62059 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VcanQ62059 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.36□□□□□ -0.75
VcanQ62059 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VcanQ62059 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VcanQ62059 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
VcanQ62059 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
VcanQ62059 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
VcanQ62059 Gm14853-201ENSMUST00000116081 549 ntBASIC10.36□□□□□ -0.75
VcanQ62059 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC10.36□□□□□ -0.75
VcanQ62059 Lsm5-201ENSMUST00000170382 494 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VcanQ62059 Gm20495-201ENSMUST00000173902 235 ntBASIC10.36□□□□□ -0.75
VcanQ62059 Ccdc28a-205ENSMUST00000174592 882 ntTSL 5 BASIC10.36□□□□□ -0.75
VcanQ62059 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC10.36□□□□□ -0.75
VcanQ62059 Gm3116-201ENSMUST00000189440 1116 ntBASIC10.36□□□□□ -0.75
VcanQ62059 4933436E23Rik-201ENSMUST00000192824 1111 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VcanQ62059 Gm37486-201ENSMUST00000195663 405 ntBASIC10.36□□□□□ -0.75
VcanQ62059 Cd24a-202ENSMUST00000214476 743 ntAPPRIS ALT2 TSL 3 BASIC10.36□□□□□ -0.75
VcanQ62059 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VcanQ62059 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VcanQ62059 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
VcanQ62059 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VcanQ62059 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
VcanQ62059 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
VcanQ62059 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VcanQ62059 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VcanQ62059 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VcanQ62059 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VcanQ62059 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VcanQ62059 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
VcanQ62059 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VcanQ62059 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VcanQ62059 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
VcanQ62059 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
VcanQ62059 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC10.36□□□□□ -0.75
VcanQ62059 Dpep2-202ENSMUST00000117555 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
VcanQ62059 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VcanQ62059 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
VcanQ62059 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.36□□□□□ -0.75
VcanQ62059 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
VcanQ62059 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VcanQ62059 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VcanQ62059 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.36□□□□□ -0.75
VcanQ62059 Gm12397-201ENSMUST00000117674 615 ntBASIC10.35□□□□□ -0.75
VcanQ62059 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC10.35□□□□□ -0.75
VcanQ62059 Gm15258-201ENSMUST00000153801 741 ntBASIC10.35□□□□□ -0.75
VcanQ62059 Tnni1-208ENSMUST00000154463 749 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
VcanQ62059 Gm17197-201ENSMUST00000163160 452 ntTSL 2 BASIC10.35□□□□□ -0.75
VcanQ62059 Gm8488-201ENSMUST00000176112 1280 ntBASIC10.35□□□□□ -0.75
VcanQ62059 1700063D05Rik-203ENSMUST00000191461 666 ntTSL 2 BASIC10.35□□□□□ -0.75
VcanQ62059 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
VcanQ62059 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
VcanQ62059 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VcanQ62059 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VcanQ62059 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VcanQ62059 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.35□□□□□ -0.75
VcanQ62059 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
VcanQ62059 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
VcanQ62059 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VcanQ62059 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.35□□□□□ -0.75
VcanQ62059 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
VcanQ62059 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms