Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CDC42P60953 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.37□□□□□ -0.27
CDC42P60953 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.37□□□□□ -0.27
CDC42P60953 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.37□□□□□ -0.27
CDC42P60953 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.37□□□□□ -0.27
CDC42P60953 CNN2P2-201ENST00000443536 909 ntBASIC13.37□□□□□ -0.27
CDC42P60953 AC114812.1-204ENST00000449669 728 ntBASIC13.37□□□□□ -0.27
CDC42P60953 CNN2P3-201ENST00000450201 906 ntBASIC13.37□□□□□ -0.27
CDC42P60953 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.37□□□□□ -0.27
CDC42P60953 GIMAP3P-201ENST00000495150 836 ntBASIC13.37□□□□□ -0.27
CDC42P60953 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.37□□□□□ -0.27
CDC42P60953 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.37□□□□□ -0.27
CDC42P60953 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.37□□□□□ -0.27
CDC42P60953 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.37□□□□□ -0.27
CDC42P60953 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.37□□□□□ -0.27
CDC42P60953 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
CDC42P60953 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.37□□□□□ -0.27
CDC42P60953 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.37□□□□□ -0.27
CDC42P60953 AL844908.2-201ENST00000609461 460 ntBASIC13.37□□□□□ -0.27
CDC42P60953 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.37□□□□□ -0.27
CDC42P60953 AL136317.3-201ENST00000618497 906 ntBASIC13.37□□□□□ -0.27
CDC42P60953 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.37□□□□□ -0.27
CDC42P60953 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 AC019294.4-201ENST00000561777 2905 ntBASIC13.37□□□□□ -0.27
CDC42P60953 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.37□□□□□ -0.27
CDC42P60953 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.37□□□□□ -0.27
CDC42P60953 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.37□□□□□ -0.27
CDC42P60953 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
CDC42P60953 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CDC42P60953 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CDC42P60953 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42P60953 BTBD7P1-201ENST00000447253 1453 ntBASIC13.36□□□□□ -0.27
CDC42P60953 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42P60953 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.36□□□□□ -0.27
CDC42P60953 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42P60953 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42P60953 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42P60953 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42P60953 AC139712.1-201ENST00000378256 1875 ntBASIC13.36□□□□□ -0.27
CDC42P60953 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CDC42P60953 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.36□□□□□ -0.27
CDC42P60953 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42P60953 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42P60953 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42P60953 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42P60953 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42P60953 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42P60953 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CDC42P60953 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42P60953 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CDC42P60953 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CDC42P60953 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.36□□□□□ -0.27
CDC42P60953 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42P60953 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.36□□□□□ -0.27
CDC42P60953 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.36□□□□□ -0.27
CDC42P60953 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.36□□□□□ -0.27
CDC42P60953 AC254562.1-201ENST00000417586 456 ntBASIC13.36□□□□□ -0.27
CDC42P60953 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.36□□□□□ -0.27
CDC42P60953 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42P60953 AC125807.1-201ENST00000483097 614 ntBASIC13.36□□□□□ -0.27
CDC42P60953 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.36□□□□□ -0.27
CDC42P60953 AC103988.2-201ENST00000561804 725 ntBASIC13.36□□□□□ -0.27
CDC42P60953 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.36□□□□□ -0.27
CDC42P60953 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.36□□□□□ -0.27
CDC42P60953 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.36□□□□□ -0.27
CDC42P60953 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42P60953 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.36□□□□□ -0.27
CDC42P60953 AC007431.3-201ENST00000623221 587 ntBASIC13.36□□□□□ -0.27
CDC42P60953 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42P60953 REXO1L1P-201ENST00000379010 6598 ntBASIC13.36□□□□□ -0.27
CDC42P60953 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.36□□□□□ -0.27
CDC42P60953 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42P60953 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.36□□□□□ -0.27
CDC42P60953 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42P60953 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
CDC42P60953 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDC42P60953 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CDC42P60953 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms