Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6BP35913 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC17.69■□□□□ 0.42
PDE6BP35913 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.69■□□□□ 0.42
PDE6BP35913 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC17.69■□□□□ 0.42
PDE6BP35913 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6BP35913 CCT8L1P-201ENST00000465400 1674 ntBASIC17.69■□□□□ 0.42
PDE6BP35913 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6BP35913 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PDE6BP35913 AL161932.2-201ENST00000435436 679 ntBASIC17.69■□□□□ 0.42
PDE6BP35913 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC17.69■□□□□ 0.42
PDE6BP35913 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6BP35913 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC17.69■□□□□ 0.42
PDE6BP35913 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC17.69■□□□□ 0.42
PDE6BP35913 PFN2-212ENST00000490975 858 ntTSL 4 BASIC17.69■□□□□ 0.42
PDE6BP35913 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6BP35913 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC17.69■□□□□ 0.42
PDE6BP35913 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC17.69■□□□□ 0.42
PDE6BP35913 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6BP35913 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC17.69■□□□□ 0.42
PDE6BP35913 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PDE6BP35913 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PDE6BP35913 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PDE6BP35913 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PDE6BP35913 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PDE6BP35913 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PDE6BP35913 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PDE6BP35913 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.69■□□□□ 0.42
PDE6BP35913 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6BP35913 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6BP35913 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6BP35913 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PDE6BP35913 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6BP35913 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.69■□□□□ 0.42
PDE6BP35913 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6BP35913 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6BP35913 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6BP35913 AC004554.1-201ENST00000422830 1468 ntBASIC17.69■□□□□ 0.42
PDE6BP35913 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PDE6BP35913 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6BP35913 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6BP35913 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6BP35913 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6BP35913 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.68■□□□□ 0.42
PDE6BP35913 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6BP35913 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
PDE6BP35913 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC17.68■□□□□ 0.42
PDE6BP35913 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6BP35913 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6BP35913 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6BP35913 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PDE6BP35913 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6BP35913 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6BP35913 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PDE6BP35913 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
PDE6BP35913 OR52M2P-201ENST00000414298 959 ntBASIC17.68■□□□□ 0.42
PDE6BP35913 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC17.68■□□□□ 0.42
PDE6BP35913 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC17.68■□□□□ 0.42
PDE6BP35913 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6BP35913 SORD2P-201ENST00000558556 1069 ntBASIC17.68■□□□□ 0.42
PDE6BP35913 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC17.68■□□□□ 0.42
PDE6BP35913 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC17.68■□□□□ 0.42
PDE6BP35913 AC091769.1-201ENST00000619576 568 ntBASIC17.68■□□□□ 0.42
PDE6BP35913 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6BP35913 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6BP35913 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6BP35913 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6BP35913 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.68■□□□□ 0.42
PDE6BP35913 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PDE6BP35913 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6BP35913 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
PDE6BP35913 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6BP35913 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6BP35913 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PDE6BP35913 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PDE6BP35913 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.68■□□□□ 0.42
PDE6BP35913 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.68■□□□□ 0.42
PDE6BP35913 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6BP35913 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDE6BP35913 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PDE6BP35913 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC17.67■□□□□ 0.42
PDE6BP35913 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.67■□□□□ 0.42
PDE6BP35913 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6BP35913 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6BP35913 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PDE6BP35913 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6BP35913 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC17.67■□□□□ 0.42
PDE6BP35913 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.67■□□□□ 0.42
PDE6BP35913 AL357373.1-201ENST00000394974 322 ntBASIC17.67■□□□□ 0.42
PDE6BP35913 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6BP35913 HNRNPA1P58-201ENST00000403629 610 ntBASIC17.67■□□□□ 0.42
PDE6BP35913 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6BP35913 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6BP35913 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC17.67■□□□□ 0.42
PDE6BP35913 AL451000.1-201ENST00000451300 1186 ntBASIC17.67■□□□□ 0.42
PDE6BP35913 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PDE6BP35913 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC17.67■□□□□ 0.42
PDE6BP35913 CHCHD2P2-201ENST00000503744 321 ntBASIC17.67■□□□□ 0.42
PDE6BP35913 RBM4-207ENST00000506523 654 ntTSL 3 BASIC17.67■□□□□ 0.42
PDE6BP35913 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC17.67■□□□□ 0.42
PDE6BP35913 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms