Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Gm5706-201ENSMUST00000181525 993 ntBASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Rnf123-207ENSMUST00000160249 4426 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Tifab-202ENSMUST00000225063 2718 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Olfr1221-202ENSMUST00000143255 2800 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Gm44753-201ENSMUST00000207739 2335 ntTSL 5 BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Prox2-201ENSMUST00000110249 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Apod-203ENSMUST00000130560 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 AC117245.3-201ENSMUST00000217495 2176 ntBASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Cass4-203ENSMUST00000109136 2702 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Gm45714-201ENSMUST00000211466 2722 ntBASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Taok3-210ENSMUST00000179276 4302 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Gtf2a1Q99PM3 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Gtf2a1Q99PM3 Treml2-201ENSMUST00000170941 4509 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf2a1Q99PM3 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf2a1Q99PM3 Olfr56-206ENSMUST00000203810 1990 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Gtf2a1Q99PM3 Arhgef9-204ENSMUST00000113882 2445 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Gtf2a1Q99PM3 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.38□□□□□ -0.43
Gtf2a1Q99PM3 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf2a1Q99PM3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Gtf2a1Q99PM3 Galnt1-201ENSMUST00000000430 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf2a1Q99PM3 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf2a1Q99PM3 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf2a1Q99PM3 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Gtf2a1Q99PM3 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.38□□□□□ -0.43
Gtf2a1Q99PM3 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf2a1Q99PM3 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf2a1Q99PM3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf2a1Q99PM3 Nudcd3-201ENSMUST00000066496 3927 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf2a1Q99PM3 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf2a1Q99PM3 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf2a1Q99PM3 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf2a1Q99PM3 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf2a1Q99PM3 Sytl4-202ENSMUST00000113294 2958 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf2a1Q99PM3 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.38□□□□□ -0.43
Gtf2a1Q99PM3 Rassf5-202ENSMUST00000068564 3076 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf2a1Q99PM3 Lnpk-201ENSMUST00000064503 3195 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf2a1Q99PM3 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf2a1Q99PM3 Arhgap36-201ENSMUST00000042444 2733 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Gtf2a1Q99PM3 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf2a1Q99PM3 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf2a1Q99PM3 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Gm28945-201ENSMUST00000187780 2165 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Gm29622-201ENSMUST00000190914 2165 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Pcdhb6-201ENSMUST00000061717 3729 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Mbnl3-201ENSMUST00000041495 1803 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Odf2-205ENSMUST00000113757 3082 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Gm16059-201ENSMUST00000135583 3778 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Gdpd1-201ENSMUST00000020804 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Mblac2-201ENSMUST00000057598 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Ubap2-201ENSMUST00000030143 4368 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Gm44284-201ENSMUST00000203836 3444 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Gm28693-202ENSMUST00000190758 331 ntBASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Gm43966-201ENSMUST00000203301 612 ntBASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 AC160929.1-201ENSMUST00000221247 415 ntBASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Mdga2-212ENSMUST00000222987 1388 ntTSL 5 BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Cbr4-201ENSMUST00000034058 4309 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Zcchc12-201ENSMUST00000048067 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Gm37567-201ENSMUST00000193241 2279 ntBASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 March1-206ENSMUST00000110256 3288 ntTSL 5 BASIC12.37□□□□□ -0.43
Gtf2a1Q99PM3 Mfsd11-201ENSMUST00000021173 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms