Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 LINC02105-202ENST00000511953 870 ntTSL 3 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 NDUFB10P1-201ENST00000567319 521 ntBASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 AL589743.3-201ENST00000604121 517 ntBASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 AC108102.1-201ENST00000606528 548 ntTSL 3 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 TSPAN16-206ENST00000621731 642 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 AC060834.1-201ENST00000443027 2032 ntBASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 KRTAP12-4-201ENST00000391618 447 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 PPP1R2P1-209ENST00000420261 678 ntBASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 YBX1P7-201ENST00000436766 535 ntBASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 IP6K2-218ENST00000443964 973 ntTSL 4 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 RPL7AP11-201ENST00000486538 799 ntBASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 AC073655.2-201ENST00000551941 796 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 AL390728.2-201ENST00000400933 1670 ntBASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 AC087289.5-201ENST00000586076 3175 ntBASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 TPT1-203ENST00000379056 1101 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 RPSAP19-201ENST00000431241 880 ntBASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 RBMS3-207ENST00000445033 1120 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 AC034229.1-201ENST00000506299 943 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 SLC10A7-208ENST00000511374 869 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 ST3GAL1P1-201ENST00000513810 1014 ntBASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 AC023794.3-201ENST00000514503 564 ntTSL 3 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 PITPNC1-204ENST00000581322 1124 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 AC090950.2-201ENST00000624280 660 ntBASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 ZNF669-204ENST00000448299 1718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 AC215219.1-201ENST00000400706 1817 ntBASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 GZMH-202ENST00000382548 687 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 AL117350.1-201ENST00000418348 640 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 APOBEC3H-203ENST00000421988 592 ntTSL 5 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 AC004870.4-202ENST00000433337 455 ntTSL 3 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 AL390061.1-201ENST00000457804 293 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 AC104561.2-201ENST00000523257 519 ntBASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 RPL10P13-201ENST00000550757 303 ntBASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 AC104758.4-201ENST00000565869 353 ntTSL 3 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 BET1-201ENST00000222547 1504 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 U3.5-201ENST00000363448 216 ntBASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 RN7SL150P-201ENST00000462298 262 ntBASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 SNORA50B-201ENST00000517198 135 ntBASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 AP001266.1-201ENST00000531155 1044 ntTSL 2 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 AC008897.3-201ENST00000607296 483 ntBASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 SNORA50B-202ENST00000630737 137 ntBASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 NIFK-AS1-202ENST00000414554 1411 ntTSL 2 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 AC006504.5-208ENST00000588784 2401 ntBASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 AC003102.2-201ENST00000589195 1469 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms