Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn9aQ62205 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn9aQ62205 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn9aQ62205 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Scn9aQ62205 Gm13608-201ENSMUST00000121807 1406 ntBASIC13.24□□□□□ -0.29
Scn9aQ62205 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Scn9aQ62205 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.24□□□□□ -0.29
Scn9aQ62205 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn9aQ62205 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.24□□□□□ -0.29
Scn9aQ62205 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn9aQ62205 Gm42815-201ENSMUST00000198787 1470 ntBASIC13.24□□□□□ -0.29
Scn9aQ62205 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn9aQ62205 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn9aQ62205 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Scn9aQ62205 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn9aQ62205 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn9aQ62205 Gm15636-201ENSMUST00000119205 668 ntBASIC13.23□□□□□ -0.29
Scn9aQ62205 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scn9aQ62205 Gm28671-201ENSMUST00000187036 692 ntBASIC13.23□□□□□ -0.29
Scn9aQ62205 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC13.23□□□□□ -0.29
Scn9aQ62205 Gm3926-201ENSMUST00000223378 1123 ntBASIC13.23□□□□□ -0.29
Scn9aQ62205 AC154461.1-201ENSMUST00000224207 1005 ntBASIC13.23□□□□□ -0.29
Scn9aQ62205 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn9aQ62205 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn9aQ62205 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Scn9aQ62205 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC13.23□□□□□ -0.29
Scn9aQ62205 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn9aQ62205 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn9aQ62205 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Scn9aQ62205 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn9aQ62205 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn9aQ62205 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn9aQ62205 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC13.23□□□□□ -0.29
Scn9aQ62205 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn9aQ62205 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scn9aQ62205 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn9aQ62205 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
Scn9aQ62205 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn9aQ62205 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scn9aQ62205 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Scn9aQ62205 Gm12028-201ENSMUST00000118065 436 ntBASIC13.23□□□□□ -0.29
Scn9aQ62205 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scn9aQ62205 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Scn9aQ62205 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC13.23□□□□□ -0.29
Scn9aQ62205 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC13.23□□□□□ -0.29
Scn9aQ62205 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn9aQ62205 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn9aQ62205 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.23□□□□□ -0.29
Scn9aQ62205 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn9aQ62205 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn9aQ62205 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn9aQ62205 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn9aQ62205 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn9aQ62205 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn9aQ62205 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn9aQ62205 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn9aQ62205 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn9aQ62205 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn9aQ62205 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn9aQ62205 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.22□□□□□ -0.29
Scn9aQ62205 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn9aQ62205 Gm11380-201ENSMUST00000118067 560 ntBASIC13.22□□□□□ -0.29
Scn9aQ62205 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn9aQ62205 Gm5210-201ENSMUST00000182150 1010 ntBASIC13.22□□□□□ -0.29
Scn9aQ62205 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
Scn9aQ62205 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Scn9aQ62205 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn9aQ62205 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn9aQ62205 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn9aQ62205 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn9aQ62205 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn9aQ62205 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Scn9aQ62205 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn9aQ62205 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn9aQ62205 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn9aQ62205 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
Scn9aQ62205 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn9aQ62205 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn9aQ62205 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn9aQ62205 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn9aQ62205 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Scn9aQ62205 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Scn9aQ62205 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn9aQ62205 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC13.21□□□□□ -0.29
Scn9aQ62205 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC13.21□□□□□ -0.29
Scn9aQ62205 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn9aQ62205 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn9aQ62205 AC102523.1-201ENSMUST00000228706 1144 ntBASIC13.21□□□□□ -0.29
Scn9aQ62205 Gm10020-201ENSMUST00000081993 612 ntBASIC13.21□□□□□ -0.29
Scn9aQ62205 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn9aQ62205 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Scn9aQ62205 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn9aQ62205 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn9aQ62205 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn9aQ62205 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn9aQ62205 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn9aQ62205 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.29
Scn9aQ62205 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn9aQ62205 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn9aQ62205 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms