Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 FADS2-205ENST00000517839 469 ntTSL 3 BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 SPDYE22P-201ENST00000582158 798 ntBASIC11.27□□□□□ -0.61
HIST1H1AQ02539 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 AC004233.3-201ENST00000607794 1269 ntBASIC11.27□□□□□ -0.61
HIST1H1AQ02539 AC093726.1-201ENST00000608064 963 ntBASIC11.27□□□□□ -0.61
HIST1H1AQ02539 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 FES-203ENST00000394302 2133 ntTSL 5 BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 SLC7A15P-201ENST00000424028 1363 ntBASIC11.27□□□□□ -0.61
HIST1H1AQ02539 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC11.27□□□□□ -0.61
HIST1H1AQ02539 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 KRT8P14-201ENST00000414254 1442 ntBASIC11.26□□□□□ -0.61
HIST1H1AQ02539 KRT8P22-201ENST00000562317 1415 ntBASIC11.26□□□□□ -0.61
HIST1H1AQ02539 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 OS9-206ENST00000435406 2346 ntTSL 2 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 AL139094.1-201ENST00000405549 1188 ntBASIC11.26□□□□□ -0.61
HIST1H1AQ02539 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 AC092183.1-201ENST00000469884 875 ntBASIC11.26□□□□□ -0.61
HIST1H1AQ02539 CYMP-203ENST00000474680 1263 ntBASIC11.26□□□□□ -0.61
HIST1H1AQ02539 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 AC123567.1-201ENST00000548294 1261 ntBASIC11.26□□□□□ -0.61
HIST1H1AQ02539 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 AC008761.3-201ENST00000624803 892 ntBASIC11.26□□□□□ -0.61
HIST1H1AQ02539 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms