Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Col18a1P39061 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col18a1P39061 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col18a1P39061 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col18a1P39061 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col18a1P39061 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col18a1P39061 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col18a1P39061 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Col18a1P39061 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Col18a1P39061 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col18a1P39061 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Col18a1P39061 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col18a1P39061 Gm45719-201ENSMUST00000207954 1662 ntBASIC14.74□□□□□ -0.05
Col18a1P39061 Galntl5-202ENSMUST00000114965 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col18a1P39061 AC109214.1-201ENSMUST00000219520 1372 ntBASIC14.74□□□□□ -0.05
Col18a1P39061 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col18a1P39061 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col18a1P39061 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col18a1P39061 Ube2l3-203ENSMUST00000115700 571 ntTSL 5 BASIC14.74□□□□□ -0.05
Col18a1P39061 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC14.74□□□□□ -0.05
Col18a1P39061 Actg2-202ENSMUST00000121731 1273 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Col18a1P39061 Gm6881-201ENSMUST00000121811 833 ntBASIC14.74□□□□□ -0.05
Col18a1P39061 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC14.74□□□□□ -0.05
Col18a1P39061 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col18a1P39061 Gm23999-201ENSMUST00000158057 104 ntBASIC14.74□□□□□ -0.05
Col18a1P39061 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Col18a1P39061 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC14.74□□□□□ -0.05
Col18a1P39061 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col18a1P39061 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC14.74□□□□□ -0.05
Col18a1P39061 Gm28032-201ENSMUST00000184104 96 ntBASIC14.74□□□□□ -0.05
Col18a1P39061 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col18a1P39061 Gimd1-205ENSMUST00000212852 1234 ntTSL 5 BASIC14.74□□□□□ -0.05
Col18a1P39061 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Col18a1P39061 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Col18a1P39061 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col18a1P39061 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col18a1P39061 3110001I22Rik-201ENSMUST00000035426 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col18a1P39061 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col18a1P39061 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col18a1P39061 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col18a1P39061 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col18a1P39061 Gm45110-201ENSMUST00000205704 1402 ntBASIC14.74□□□□□ -0.05
Col18a1P39061 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col18a1P39061 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col18a1P39061 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col18a1P39061 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col18a1P39061 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col18a1P39061 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col18a1P39061 Rab38-201ENSMUST00000107256 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col18a1P39061 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Col18a1P39061 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col18a1P39061 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Col18a1P39061 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col18a1P39061 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col18a1P39061 Uros-204ENSMUST00000106146 1483 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Col18a1P39061 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col18a1P39061 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col18a1P39061 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col18a1P39061 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col18a1P39061 Gm24470-201ENSMUST00000104486 132 ntBASIC14.73□□□□□ -0.05
Col18a1P39061 Cyp2j15-ps-201ENSMUST00000122267 686 ntBASIC14.73□□□□□ -0.05
Col18a1P39061 Gm12796-201ENSMUST00000131864 344 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col18a1P39061 Gm13898-201ENSMUST00000141865 610 ntBASIC14.73□□□□□ -0.05
Col18a1P39061 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
Col18a1P39061 Gm29487-201ENSMUST00000190146 256 ntBASIC14.73□□□□□ -0.05
Col18a1P39061 Gm45808-201ENSMUST00000210701 789 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Col18a1P39061 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Col18a1P39061 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col18a1P39061 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col18a1P39061 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col18a1P39061 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col18a1P39061 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col18a1P39061 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Col18a1P39061 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col18a1P39061 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Col18a1P39061 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col18a1P39061 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col18a1P39061 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col18a1P39061 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col18a1P39061 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col18a1P39061 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col18a1P39061 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col18a1P39061 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col18a1P39061 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col18a1P39061 Ppp1r2-ps4-201ENSMUST00000112182 633 ntBASIC14.73□□□□□ -0.05
Col18a1P39061 Gm13792-201ENSMUST00000121350 423 ntBASIC14.73□□□□□ -0.05
Col18a1P39061 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC14.73□□□□□ -0.05
Col18a1P39061 Gm11608-202ENSMUST00000153049 877 ntTSL 3 BASIC14.73□□□□□ -0.05
Col18a1P39061 Gm23555-201ENSMUST00000157815 135 ntBASIC14.73□□□□□ -0.05
Col18a1P39061 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC14.73□□□□□ -0.05
Col18a1P39061 Gm20610-201ENSMUST00000176406 587 ntTSL 5 BASIC14.73□□□□□ -0.05
Col18a1P39061 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col18a1P39061 Ighv1-8-201ENSMUST00000192236 293 ntBASIC14.73□□□□□ -0.05
Col18a1P39061 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC14.73□□□□□ -0.05
Col18a1P39061 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col18a1P39061 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col18a1P39061 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col18a1P39061 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col18a1P39061 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col18a1P39061 Gm14538-201ENSMUST00000122019 1327 ntBASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms