Protein–RNA interactions for Protein: P28230

Gjb1, Gap junction beta-1 protein, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gjb1P28230 AC103672.1-201ENSMUST00000227502 365 ntBASIC12.74□□□□□ -0.37
Gjb1P28230 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gjb1P28230 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC12.74□□□□□ -0.37
Gjb1P28230 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gjb1P28230 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gjb1P28230 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gjb1P28230 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gjb1P28230 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Gjb1P28230 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gjb1P28230 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Gjb1P28230 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gjb1P28230 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gjb1P28230 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gjb1P28230 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.74□□□□□ -0.37
Gjb1P28230 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gjb1P28230 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Gjb1P28230 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gjb1P28230 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gjb1P28230 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gjb1P28230 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gjb1P28230 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gjb1P28230 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.73□□□□□ -0.37
Gjb1P28230 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gjb1P28230 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gjb1P28230 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gjb1P28230 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gjb1P28230 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gjb1P28230 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gjb1P28230 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gjb1P28230 Paupar-201ENSMUST00000194826 3482 ntBASIC12.73□□□□□ -0.37
Gjb1P28230 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gjb1P28230 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.73□□□□□ -0.37
Gjb1P28230 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gjb1P28230 AC022682.1-201ENSMUST00000224624 2023 ntBASIC12.73□□□□□ -0.37
Gjb1P28230 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gjb1P28230 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.73□□□□□ -0.37
Gjb1P28230 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC12.73□□□□□ -0.37
Gjb1P28230 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Gjb1P28230 Gm15746-201ENSMUST00000120684 1027 ntBASIC12.73□□□□□ -0.37
Gjb1P28230 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC12.73□□□□□ -0.37
Gjb1P28230 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gjb1P28230 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
Gjb1P28230 Gm26119-201ENSMUST00000175601 104 ntBASIC12.73□□□□□ -0.37
Gjb1P28230 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gjb1P28230 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC12.73□□□□□ -0.37
Gjb1P28230 Gm42599-201ENSMUST00000201308 469 ntBASIC12.73□□□□□ -0.37
Gjb1P28230 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC12.73□□□□□ -0.37
Gjb1P28230 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.73□□□□□ -0.37
Gjb1P28230 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.73□□□□□ -0.37
Gjb1P28230 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC12.73□□□□□ -0.37
Gjb1P28230 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Gjb1P28230 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Gjb1P28230 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gjb1P28230 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gjb1P28230 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.73□□□□□ -0.37
Gjb1P28230 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.73□□□□□ -0.37
Gjb1P28230 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gjb1P28230 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gjb1P28230 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gjb1P28230 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gjb1P28230 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Gjb1P28230 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gjb1P28230 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gjb1P28230 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gjb1P28230 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Gjb1P28230 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gjb1P28230 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.72□□□□□ -0.37
Gjb1P28230 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Gjb1P28230 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Gjb1P28230 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gjb1P28230 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.72□□□□□ -0.37
Gjb1P28230 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gjb1P28230 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gjb1P28230 Gm12912-201ENSMUST00000121596 1381 ntBASIC12.72□□□□□ -0.37
Gjb1P28230 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gjb1P28230 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gjb1P28230 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gjb1P28230 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gjb1P28230 Gm12470-201ENSMUST00000117239 1049 ntBASIC12.72□□□□□ -0.37
Gjb1P28230 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC12.72□□□□□ -0.37
Gjb1P28230 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gjb1P28230 Gm5529-201ENSMUST00000165691 891 ntBASIC12.72□□□□□ -0.37
Gjb1P28230 Gm4775-201ENSMUST00000169588 402 ntBASIC12.72□□□□□ -0.37
Gjb1P28230 Gm25872-201ENSMUST00000177784 100 ntBASIC12.72□□□□□ -0.37
Gjb1P28230 Gm27440-201ENSMUST00000184785 107 ntBASIC12.72□□□□□ -0.37
Gjb1P28230 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC12.72□□□□□ -0.37
Gjb1P28230 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Gjb1P28230 Gm43866-201ENSMUST00000203894 839 ntBASIC12.72□□□□□ -0.37
Gjb1P28230 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.72□□□□□ -0.37
Gjb1P28230 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC12.72□□□□□ -0.37
Gjb1P28230 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Gjb1P28230 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gjb1P28230 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gjb1P28230 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Gjb1P28230 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gjb1P28230 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Gjb1P28230 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gjb1P28230 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gjb1P28230 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gjb1P28230 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms