Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 CT009713.2-201ENSMUST00000225532 1149 ntBASIC17.28■□□□□ 0.36
Polr1aO35134 Gm25514-201ENSMUST00000083860 135 ntBASIC17.28■□□□□ 0.36
Polr1aO35134 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Polr1aO35134 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Polr1aO35134 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Polr1aO35134 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Polr1aO35134 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Polr1aO35134 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Polr1aO35134 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Polr1aO35134 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Polr1aO35134 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Polr1aO35134 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Polr1aO35134 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Polr1aO35134 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Polr1aO35134 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Polr1aO35134 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Polr1aO35134 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Polr1aO35134 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Polr1aO35134 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Polr1aO35134 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Polr1aO35134 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC17.28■□□□□ 0.36
Polr1aO35134 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Polr1aO35134 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Polr1aO35134 Gm5395-201ENSMUST00000121650 915 ntBASIC17.27■□□□□ 0.36
Polr1aO35134 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC17.27■□□□□ 0.36
Polr1aO35134 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Polr1aO35134 Mir8111-201ENSMUST00000184463 137 ntBASIC17.27■□□□□ 0.36
Polr1aO35134 Gm7047-201ENSMUST00000196224 1063 ntBASIC17.27■□□□□ 0.36
Polr1aO35134 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC17.27■□□□□ 0.36
Polr1aO35134 AC154806.7-201ENSMUST00000227998 202 ntBASIC17.27■□□□□ 0.36
Polr1aO35134 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Polr1aO35134 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Polr1aO35134 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Polr1aO35134 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Polr1aO35134 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Polr1aO35134 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Polr1aO35134 Gm42858-201ENSMUST00000202512 1704 ntBASIC17.27■□□□□ 0.36
Polr1aO35134 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Polr1aO35134 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Polr1aO35134 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Polr1aO35134 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Polr1aO35134 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Polr1aO35134 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.35
Polr1aO35134 Gm12028-201ENSMUST00000118065 436 ntBASIC17.27■□□□□ 0.35
Polr1aO35134 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC17.27■□□□□ 0.35
Polr1aO35134 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC17.27■□□□□ 0.35
Polr1aO35134 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC17.27■□□□□ 0.35
Polr1aO35134 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Polr1aO35134 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC17.27■□□□□ 0.35
Polr1aO35134 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Polr1aO35134 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Polr1aO35134 Gm3926-201ENSMUST00000223378 1123 ntBASIC17.27■□□□□ 0.35
Polr1aO35134 AC101205.2-201ENSMUST00000226206 715 ntBASIC17.27■□□□□ 0.35
Polr1aO35134 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC17.27■□□□□ 0.35
Polr1aO35134 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Polr1aO35134 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Polr1aO35134 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Polr1aO35134 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Polr1aO35134 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Polr1aO35134 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Polr1aO35134 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC17.26■□□□□ 0.35
Polr1aO35134 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Polr1aO35134 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Polr1aO35134 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Polr1aO35134 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Polr1aO35134 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Polr1aO35134 Gm37324-201ENSMUST00000194500 4504 ntBASIC17.26■□□□□ 0.35
Polr1aO35134 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Polr1aO35134 Mir1941-201ENSMUST00000157834 83 ntBASIC17.26■□□□□ 0.35
Polr1aO35134 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Polr1aO35134 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Polr1aO35134 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC17.26■□□□□ 0.35
Polr1aO35134 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Polr1aO35134 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Polr1aO35134 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Polr1aO35134 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Polr1aO35134 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Polr1aO35134 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Polr1aO35134 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Polr1aO35134 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Polr1aO35134 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Polr1aO35134 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Polr1aO35134 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Polr1aO35134 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Polr1aO35134 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Polr1aO35134 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Polr1aO35134 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Polr1aO35134 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Polr1aO35134 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Polr1aO35134 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Polr1aO35134 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Polr1aO35134 Gm23439-201ENSMUST00000104292 132 ntBASIC17.25■□□□□ 0.35
Polr1aO35134 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Polr1aO35134 Gm5510-201ENSMUST00000117826 486 ntBASIC17.25■□□□□ 0.35
Polr1aO35134 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Polr1aO35134 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC17.25■□□□□ 0.35
Polr1aO35134 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC17.25■□□□□ 0.35
Polr1aO35134 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Polr1aO35134 Cd9-ps-201ENSMUST00000174687 650 ntBASIC17.25■□□□□ 0.35
Polr1aO35134 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms