Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 MIR3188-201ENST00000583494 85 ntBASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 AC008972.2-201ENST00000606587 494 ntBASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CNTNAP3Q9BZ76 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.9□□□□□ -0.19
CNTNAP3Q9BZ76 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC13.9□□□□□ -0.19
CNTNAP3Q9BZ76 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CNTNAP3Q9BZ76 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 AC009093.2-202ENST00000620513 2079 ntBASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 AC008536.3-201ENST00000623282 1599 ntBASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 CSNK1G2P1-201ENST00000442675 955 ntBASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 BPIFB5P-201ENST00000457066 1099 ntBASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 AC090136.2-201ENST00000517809 420 ntBASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 AC007250.1-201ENST00000608934 338 ntBASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 AL357143.1-203ENST00000639750 881 ntBASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CNTNAP3Q9BZ76 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 AC006058.4-201ENST00000624016 1670 ntBASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms