Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 AC026410.1-201ENST00000507366 1101 ntBASIC15.34■□□□□ 0.05
CASD1Q96PB1 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CASD1Q96PB1 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC15.34■□□□□ 0.05
CASD1Q96PB1 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC15.34■□□□□ 0.05
CASD1Q96PB1 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC15.34■□□□□ 0.05
CASD1Q96PB1 AC002044.2-201ENST00000624910 970 ntBASIC15.34■□□□□ 0.05
CASD1Q96PB1 LINC00244-201ENST00000625073 613 ntBASIC15.34■□□□□ 0.05
CASD1Q96PB1 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC15.34■□□□□ 0.05
CASD1Q96PB1 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.34■□□□□ 0.05
CASD1Q96PB1 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CASD1Q96PB1 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CASD1Q96PB1 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CASD1Q96PB1 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CASD1Q96PB1 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
CASD1Q96PB1 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CASD1Q96PB1 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CASD1Q96PB1 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CASD1Q96PB1 AC068587.6-202ENST00000641839 5619 ntBASIC15.34■□□□□ 0.05
CASD1Q96PB1 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CASD1Q96PB1 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CASD1Q96PB1 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CASD1Q96PB1 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CASD1Q96PB1 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CASD1Q96PB1 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CASD1Q96PB1 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CASD1Q96PB1 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CASD1Q96PB1 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.34■□□□□ 0.05
CASD1Q96PB1 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.34■□□□□ 0.05
CASD1Q96PB1 CICP14-201ENST00000629111 2732 ntBASIC15.34■□□□□ 0.05
CASD1Q96PB1 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CASD1Q96PB1 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CASD1Q96PB1 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CASD1Q96PB1 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CASD1Q96PB1 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CASD1Q96PB1 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.34■□□□□ 0.05
CASD1Q96PB1 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CASD1Q96PB1 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CASD1Q96PB1 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CASD1Q96PB1 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CASD1Q96PB1 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
CASD1Q96PB1 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CASD1Q96PB1 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CASD1Q96PB1 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
CASD1Q96PB1 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC15.33■□□□□ 0.05
CASD1Q96PB1 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.33■□□□□ 0.05
CASD1Q96PB1 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CASD1Q96PB1 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CASD1Q96PB1 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CASD1Q96PB1 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CASD1Q96PB1 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CASD1Q96PB1 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.33■□□□□ 0.04
CASD1Q96PB1 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CASD1Q96PB1 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CASD1Q96PB1 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CASD1Q96PB1 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CASD1Q96PB1 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CASD1Q96PB1 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CASD1Q96PB1 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CASD1Q96PB1 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CASD1Q96PB1 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CASD1Q96PB1 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
CASD1Q96PB1 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CASD1Q96PB1 RN7SL564P-201ENST00000496309 250 ntBASIC15.33■□□□□ 0.04
CASD1Q96PB1 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC15.33■□□□□ 0.04
CASD1Q96PB1 AC022447.6-201ENST00000515522 438 ntBASIC15.33■□□□□ 0.04
CASD1Q96PB1 RNA5SP406-201ENST00000516106 112 ntBASIC15.33■□□□□ 0.04
CASD1Q96PB1 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
CASD1Q96PB1 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC15.33■□□□□ 0.04
CASD1Q96PB1 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CASD1Q96PB1 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC15.33■□□□□ 0.04
CASD1Q96PB1 C2orf69P1-201ENST00000563532 1093 ntBASIC15.33■□□□□ 0.04
CASD1Q96PB1 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC15.33■□□□□ 0.04
CASD1Q96PB1 AC006158.1-201ENST00000610661 249 ntBASIC15.33■□□□□ 0.04
CASD1Q96PB1 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC15.33■□□□□ 0.04
CASD1Q96PB1 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CASD1Q96PB1 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CASD1Q96PB1 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.33■□□□□ 0.04
CASD1Q96PB1 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
CASD1Q96PB1 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CASD1Q96PB1 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
CASD1Q96PB1 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CASD1Q96PB1 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CASD1Q96PB1 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASD1Q96PB1 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASD1Q96PB1 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
CASD1Q96PB1 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC15.32■□□□□ 0.04
CASD1Q96PB1 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CASD1Q96PB1 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASD1Q96PB1 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC15.32■□□□□ 0.04
CASD1Q96PB1 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CASD1Q96PB1 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASD1Q96PB1 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.32■□□□□ 0.04
CASD1Q96PB1 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.32■□□□□ 0.04
CASD1Q96PB1 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASD1Q96PB1 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASD1Q96PB1 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.32■□□□□ 0.04
CASD1Q96PB1 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.32■□□□□ 0.04
CASD1Q96PB1 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.32■□□□□ 0.04
CASD1Q96PB1 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CASD1Q96PB1 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms