Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Gm24398-201ENSMUST00000157870 109 ntBASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Gm18201-201ENSMUST00000174735 875 ntBASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Gm18351-201ENSMUST00000188646 883 ntBASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Gm42937-201ENSMUST00000197360 752 ntBASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf38bQ80SY5 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Gm14193-201ENSMUST00000105067 153 ntBASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Gm11663-201ENSMUST00000117888 290 ntBASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Gm15744-201ENSMUST00000161734 213 ntBASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Gm16107-201ENSMUST00000162523 862 ntBASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Gm17134-201ENSMUST00000166593 437 ntTSL 5 BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Gm26989-201ENSMUST00000182608 749 ntBASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Gm5513-201ENSMUST00000072982 1218 ntBASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 AC122881.1-201ENSMUST00000225757 2695 ntBASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf38bQ80SY5 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms