Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Olfr1395-203ENSMUST00000214195 2984 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Arhgap45-201ENSMUST00000043311 3499 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trem1Q9JKE2 Arhgap4-205ENSMUST00000114407 3051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Pik3c3-202ENSMUST00000115811 3084 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Xpnpep3-201ENSMUST00000041609 3236 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Gm2231-201ENSMUST00000125661 612 ntBASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC10.22□□□□□ -0.77
Trem1Q9JKE2 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Gm37497-201ENSMUST00000195830 798 ntBASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 AC162801.1-201ENSMUST00000220612 198 ntBASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Gm39244-201ENSMUST00000209663 1940 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Cyp51-201ENSMUST00000001507 3931 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 AA474408-201ENSMUST00000098110 3339 ntBASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Gm42633-201ENSMUST00000198853 2764 ntBASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Tmem108-201ENSMUST00000049452 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Irf9-203ENSMUST00000134863 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Acad10-201ENSMUST00000031412 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Gm15496-201ENSMUST00000129578 2456 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trem1Q9JKE2 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Slc7a14-202ENSMUST00000108245 3080 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.21□□□□□ -0.77
Trem1Q9JKE2 5830473C10Rik-201ENSMUST00000094615 2308 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Gpr63-201ENSMUST00000038920 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Ccdc138-201ENSMUST00000036576 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Gm8213-201ENSMUST00000118191 441 ntBASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Gm11964-201ENSMUST00000120982 444 ntBASIC10.21□□□□□ -0.77
Trem1Q9JKE2 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Gm27331-201ENSMUST00000183705 60 ntBASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.21□□□□□ -0.77
Trem1Q9JKE2 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC10.21□□□□□ -0.77
Trem1Q9JKE2 AC125206.2-201ENSMUST00000217454 574 ntBASIC10.21□□□□□ -0.77
Trem1Q9JKE2 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms