Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Gm14247-201ENSMUST00000120950 237 ntBASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Bud31-206ENSMUST00000162308 705 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Gm27320-201ENSMUST00000184892 109 ntBASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Gm8885-201ENSMUST00000189382 598 ntBASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Gm44548-201ENSMUST00000208929 192 ntBASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Gm45598-202ENSMUST00000210719 986 ntBASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Gm18377-201ENSMUST00000215141 607 ntBASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.84□□□□□ -0.67
Trim39Q9ESN2 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Gm36495-201ENSMUST00000221201 684 ntTSL 5 BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.84□□□□□ -0.67
Trim39Q9ESN2 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.67
Trim39Q9ESN2 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.67
Trim39Q9ESN2 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Trim39Q9ESN2 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Gm20854-201ENSMUST00000178889 1002 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.83□□□□□ -0.68
Trim39Q9ESN2 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Gm44651-201ENSMUST00000207343 372 ntBASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim39Q9ESN2 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Gm15276-201ENSMUST00000145953 498 ntBASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Gm37259-201ENSMUST00000193903 849 ntBASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms