Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Gm10608-202ENSMUST00000213924 676 ntBASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Gm8712-201ENSMUST00000221090 701 ntBASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Morn2-202ENSMUST00000227729 656 ntBASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 AC122881.1-201ENSMUST00000225757 2695 ntBASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Gm19040-201ENSMUST00000203280 4726 ntBASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chaf1bQ9D0N7 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Gm14644-201ENSMUST00000116671 647 ntBASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Gm26956-201ENSMUST00000182176 986 ntBASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Gm8956-201ENSMUST00000203939 825 ntBASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms