Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr1Q9CY50 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ssr1Q9CY50 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Ssr1Q9CY50 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr1Q9CY50 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ssr1Q9CY50 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ssr1Q9CY50 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr1Q9CY50 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr1Q9CY50 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ssr1Q9CY50 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr1Q9CY50 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr1Q9CY50 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ssr1Q9CY50 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr1Q9CY50 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr1Q9CY50 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr1Q9CY50 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr1Q9CY50 Gm37608-201ENSMUST00000195696 1880 ntBASIC12.51□□□□□ -0.41
Ssr1Q9CY50 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Bcl2l11-201ENSMUST00000019281 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Gm44364-201ENSMUST00000198368 141 ntBASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Gm8956-201ENSMUST00000203939 825 ntBASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr1Q9CY50 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssr1Q9CY50 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssr1Q9CY50 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssr1Q9CY50 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ssr1Q9CY50 Ovgp1-201ENSMUST00000000573 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssr1Q9CY50 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssr1Q9CY50 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ssr1Q9CY50 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ssr1Q9CY50 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssr1Q9CY50 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ssr1Q9CY50 Gm14381-201ENSMUST00000122105 414 ntBASIC12.49□□□□□ -0.41
Ssr1Q9CY50 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ssr1Q9CY50 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ssr1Q9CY50 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ssr1Q9CY50 Gm32999-201ENSMUST00000192693 562 ntBASIC12.49□□□□□ -0.41
Ssr1Q9CY50 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.49□□□□□ -0.41
Ssr1Q9CY50 Rprl1-202ENSMUST00000198476 238 ntBASIC12.49□□□□□ -0.41
Ssr1Q9CY50 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssr1Q9CY50 Gm5455-201ENSMUST00000058710 715 ntBASIC12.49□□□□□ -0.41
Ssr1Q9CY50 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssr1Q9CY50 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssr1Q9CY50 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Ssr1Q9CY50 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC12.49□□□□□ -0.41
Ssr1Q9CY50 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Ssr1Q9CY50 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC12.49□□□□□ -0.41
Ssr1Q9CY50 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssr1Q9CY50 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssr1Q9CY50 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ssr1Q9CY50 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ssr1Q9CY50 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssr1Q9CY50 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssr1Q9CY50 Gm37593-201ENSMUST00000191669 3254 ntBASIC12.49□□□□□ -0.41
Ssr1Q9CY50 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms