Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.1□□□□□ -0.79
Scrt1Q99M85 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC10.1□□□□□ -0.79
Scrt1Q99M85 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Gm12419-201ENSMUST00000116649 636 ntBASIC10.1□□□□□ -0.79
Scrt1Q99M85 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC10.1□□□□□ -0.79
Scrt1Q99M85 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Gm18201-201ENSMUST00000174735 875 ntBASIC10.1□□□□□ -0.79
Scrt1Q99M85 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Gm44506-201ENSMUST00000206278 965 ntBASIC10.1□□□□□ -0.79
Scrt1Q99M85 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Gm45500-201ENSMUST00000211676 803 ntBASIC10.1□□□□□ -0.79
Scrt1Q99M85 AC129308.3-201ENSMUST00000225652 524 ntBASIC10.1□□□□□ -0.79
Scrt1Q99M85 Gm5805-201ENSMUST00000072779 456 ntBASIC10.1□□□□□ -0.79
Scrt1Q99M85 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.1□□□□□ -0.79
Scrt1Q99M85 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.09□□□□□ -0.79
Scrt1Q99M85 Btrc-209ENSMUST00000224478 2194 ntBASIC10.09□□□□□ -0.79
Scrt1Q99M85 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.09□□□□□ -0.79
Scrt1Q99M85 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.09□□□□□ -0.79
Scrt1Q99M85 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Scrt1Q99M85 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.09□□□□□ -0.79
Scrt1Q99M85 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Scrt1Q99M85 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.09□□□□□ -0.79
Scrt1Q99M85 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Gm8342-201ENSMUST00000209839 757 ntBASIC10.09□□□□□ -0.79
Scrt1Q99M85 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms