Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC13.54□□□□□ -0.24
Col20a1Q923P0 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col20a1Q923P0 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Col20a1Q923P0 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC13.54□□□□□ -0.24
Col20a1Q923P0 Gm45410-201ENSMUST00000211331 1093 ntBASIC13.54□□□□□ -0.24
Col20a1Q923P0 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Col20a1Q923P0 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC13.54□□□□□ -0.24
Col20a1Q923P0 Gm4811-201ENSMUST00000220879 1220 ntBASIC13.54□□□□□ -0.24
Col20a1Q923P0 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Col20a1Q923P0 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col20a1Q923P0 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col20a1Q923P0 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col20a1Q923P0 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col20a1Q923P0 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col20a1Q923P0 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col20a1Q923P0 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col20a1Q923P0 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col20a1Q923P0 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Col20a1Q923P0 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC13.54□□□□□ -0.24
Col20a1Q923P0 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col20a1Q923P0 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col20a1Q923P0 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Col20a1Q923P0 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col20a1Q923P0 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col20a1Q923P0 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Col20a1Q923P0 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Col20a1Q923P0 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col20a1Q923P0 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col20a1Q923P0 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.53□□□□□ -0.24
Col20a1Q923P0 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC13.53□□□□□ -0.24
Col20a1Q923P0 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col20a1Q923P0 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col20a1Q923P0 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col20a1Q923P0 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col20a1Q923P0 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Col20a1Q923P0 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Col20a1Q923P0 Gm14807-201ENSMUST00000116640 983 ntBASIC13.53□□□□□ -0.24
Col20a1Q923P0 Gm14270-201ENSMUST00000118388 846 ntBASIC13.53□□□□□ -0.24
Col20a1Q923P0 Gm15617-201ENSMUST00000118973 771 ntBASIC13.53□□□□□ -0.24
Col20a1Q923P0 Gm14219-201ENSMUST00000120414 288 ntBASIC13.53□□□□□ -0.24
Col20a1Q923P0 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col20a1Q923P0 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col20a1Q923P0 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC13.53□□□□□ -0.24
Col20a1Q923P0 Gm9116-201ENSMUST00000192400 1018 ntBASIC13.53□□□□□ -0.24
Col20a1Q923P0 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col20a1Q923P0 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Col20a1Q923P0 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col20a1Q923P0 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col20a1Q923P0 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col20a1Q923P0 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col20a1Q923P0 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col20a1Q923P0 Gm18294-201ENSMUST00000176980 1748 ntBASIC13.53□□□□□ -0.24
Col20a1Q923P0 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col20a1Q923P0 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col20a1Q923P0 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Col20a1Q923P0 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col20a1Q923P0 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col20a1Q923P0 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Col20a1Q923P0 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Col20a1Q923P0 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col20a1Q923P0 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Col20a1Q923P0 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Col20a1Q923P0 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col20a1Q923P0 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col20a1Q923P0 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC13.52□□□□□ -0.24
Col20a1Q923P0 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Col20a1Q923P0 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col20a1Q923P0 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col20a1Q923P0 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Col20a1Q923P0 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Col20a1Q923P0 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.52□□□□□ -0.25
Col20a1Q923P0 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col20a1Q923P0 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Col20a1Q923P0 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
Col20a1Q923P0 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC13.52□□□□□ -0.25
Col20a1Q923P0 Gm22846-201ENSMUST00000157706 270 ntBASIC13.52□□□□□ -0.25
Col20a1Q923P0 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.52□□□□□ -0.25
Col20a1Q923P0 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col20a1Q923P0 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC13.52□□□□□ -0.25
Col20a1Q923P0 Gm17798-201ENSMUST00000182282 1035 ntBASIC13.52□□□□□ -0.25
Col20a1Q923P0 Gm9884-201ENSMUST00000194343 1222 ntBASIC13.52□□□□□ -0.25
Col20a1Q923P0 Gm44323-201ENSMUST00000198689 129 ntBASIC13.52□□□□□ -0.25
Col20a1Q923P0 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC13.52□□□□□ -0.25
Col20a1Q923P0 Gm45592-201ENSMUST00000209605 1043 ntBASIC13.52□□□□□ -0.25
Col20a1Q923P0 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.52□□□□□ -0.25
Col20a1Q923P0 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC13.52□□□□□ -0.25
Col20a1Q923P0 AC153152.3-201ENSMUST00000222188 1135 ntBASIC13.52□□□□□ -0.25
Col20a1Q923P0 AC129308.3-201ENSMUST00000225652 524 ntBASIC13.52□□□□□ -0.25
Col20a1Q923P0 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col20a1Q923P0 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Col20a1Q923P0 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Col20a1Q923P0 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col20a1Q923P0 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col20a1Q923P0 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col20a1Q923P0 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.52□□□□□ -0.25
Col20a1Q923P0 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC13.52□□□□□ -0.25
Col20a1Q923P0 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col20a1Q923P0 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col20a1Q923P0 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col20a1Q923P0 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms