Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 1700092E19Rik-202ENSMUST00000154703 1650 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Gm14633-201ENSMUST00000121152 470 ntBASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Gm15664-201ENSMUST00000160167 184 ntBASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Csta1-202ENSMUST00000161638 422 ntTSL 3 BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Gm22662-201ENSMUST00000175290 256 ntBASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Gm44540-201ENSMUST00000205640 354 ntBASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 AC133517.1-201ENSMUST00000225825 594 ntBASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 AC164978.2-201ENSMUST00000226645 857 ntBASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Gm8618-201ENSMUST00000097570 432 ntBASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc188F6WEU2 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Gm11380-201ENSMUST00000118067 560 ntBASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Gm14153-201ENSMUST00000119923 1139 ntBASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Gm17799-201ENSMUST00000183270 667 ntBASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Gm38349-201ENSMUST00000195732 462 ntBASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Gm18555-201ENSMUST00000197935 584 ntBASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Gm44658-201ENSMUST00000207965 637 ntBASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Gm45258-201ENSMUST00000210042 853 ntBASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Bpifa5-201ENSMUST00000028986 1089 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.55□□□□□ -0.56
Ccdc188F6WEU2 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms