Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 AC055876.3-201ENST00000431496 288 ntBASIC14.15□□□□□ -0.14
VPS33AQ96AX1 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 AC114812.1-204ENST00000449669 728 ntBASIC14.15□□□□□ -0.14
VPS33AQ96AX1 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 AC004466.1-201ENST00000599515 1080 ntBASIC14.15□□□□□ -0.14
VPS33AQ96AX1 AC138649.4-201ENST00000612222 287 ntBASIC14.15□□□□□ -0.14
VPS33AQ96AX1 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
VPS33AQ96AX1 MRPL37P1-201ENST00000592451 1337 ntBASIC14.15□□□□□ -0.15
VPS33AQ96AX1 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 GNAQP1-201ENST00000444815 1067 ntBASIC14.14□□□□□ -0.15
VPS33AQ96AX1 GIMAP3P-201ENST00000495150 836 ntBASIC14.14□□□□□ -0.15
VPS33AQ96AX1 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VPS33AQ96AX1 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 METTL21AP1-201ENST00000438852 635 ntBASIC14.13□□□□□ -0.15
VPS33AQ96AX1 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.13□□□□□ -0.15
VPS33AQ96AX1 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms