Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 AC207128.2-201ENSMUST00000223708 1924 ntBASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Gm38089-201ENSMUST00000193585 1514 ntBASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Adam22-204ENSMUST00000088761 9077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Adamts4-203ENSMUST00000219033 4386 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Gm14441-201ENSMUST00000121960 540 ntBASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Gm29649-201ENSMUST00000185649 419 ntBASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Gtpbp10-211ENSMUST00000198799 648 ntBASIC9.45□□□□□ -0.9
Smco3Q8BQM7 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Gm44799-201ENSMUST00000207639 1202 ntBASIC9.45□□□□□ -0.9
Smco3Q8BQM7 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Zfp532-201ENSMUST00000049016 5503 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Erc1-203ENSMUST00000183703 8760 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Gm43274-201ENSMUST00000202545 5000 ntBASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Gm14005-209ENSMUST00000224993 1832 ntBASIC9.45□□□□□ -0.9
Smco3Q8BQM7 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco3Q8BQM7 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 AC125409.1-201ENSMUST00000223213 3370 ntBASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Cdc42bpa-203ENSMUST00000097453 6704 ntTSL 5 BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Gm14247-201ENSMUST00000120950 237 ntBASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Gm9002-201ENSMUST00000178437 499 ntBASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Gm43579-201ENSMUST00000202387 1307 ntBASIC9.44□□□□□ -0.9
Smco3Q8BQM7 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Zscan30-202ENSMUST00000224144 1458 ntBASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms