Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Sox2P48432 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.73□□□□□ -0.69
Sox2P48432 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox2P48432 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Sox2P48432 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC10.73□□□□□ -0.69
Sox2P48432 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox2P48432 Gm11425-201ENSMUST00000119608 498 ntBASIC10.73□□□□□ -0.69
Sox2P48432 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.73□□□□□ -0.69
Sox2P48432 Gm15547-201ENSMUST00000122152 333 ntBASIC10.73□□□□□ -0.69
Sox2P48432 Gm13786-201ENSMUST00000122371 333 ntBASIC10.73□□□□□ -0.69
Sox2P48432 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox2P48432 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Sox2P48432 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.73□□□□□ -0.69
Sox2P48432 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC10.73□□□□□ -0.69
Sox2P48432 Gm5070-201ENSMUST00000177599 862 ntBASIC10.73□□□□□ -0.69
Sox2P48432 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.73□□□□□ -0.69
Sox2P48432 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox2P48432 Gm28937-201ENSMUST00000185413 695 ntBASIC10.73□□□□□ -0.69
Sox2P48432 Gm29400-201ENSMUST00000187208 695 ntBASIC10.73□□□□□ -0.69
Sox2P48432 Gm28662-201ENSMUST00000188446 695 ntBASIC10.73□□□□□ -0.69
Sox2P48432 Gm28251-201ENSMUST00000188835 695 ntBASIC10.73□□□□□ -0.69
Sox2P48432 Gm37318-201ENSMUST00000194325 695 ntBASIC10.73□□□□□ -0.69
Sox2P48432 Gm38017-201ENSMUST00000194768 695 ntBASIC10.73□□□□□ -0.69
Sox2P48432 Gm37287-201ENSMUST00000195449 695 ntBASIC10.73□□□□□ -0.69
Sox2P48432 Gm37793-201ENSMUST00000195548 695 ntBASIC10.73□□□□□ -0.69
Sox2P48432 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Sox2P48432 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC10.73□□□□□ -0.69
Sox2P48432 Gm45880-201ENSMUST00000213041 853 ntBASIC10.73□□□□□ -0.69
Sox2P48432 Gm30285-201ENSMUST00000214614 422 ntBASIC10.73□□□□□ -0.69
Sox2P48432 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox2P48432 Gm9396-201ENSMUST00000076703 567 ntBASIC10.73□□□□□ -0.69
Sox2P48432 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox2P48432 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox2P48432 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox2P48432 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox2P48432 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox2P48432 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox2P48432 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox2P48432 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.73□□□□□ -0.69
Sox2P48432 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox2P48432 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox2P48432 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox2P48432 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox2P48432 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox2P48432 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox2P48432 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.73□□□□□ -0.69
Sox2P48432 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.73□□□□□ -0.69
Sox2P48432 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.73□□□□□ -0.69
Sox2P48432 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox2P48432 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Sox2P48432 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox2P48432 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.73□□□□□ -0.69
Sox2P48432 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.72□□□□□ -0.69
Sox2P48432 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.72□□□□□ -0.69
Sox2P48432 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC10.72□□□□□ -0.69
Sox2P48432 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Sox2P48432 Gm5187-201ENSMUST00000117317 991 ntBASIC10.72□□□□□ -0.69
Sox2P48432 Gm6963-201ENSMUST00000147879 379 ntBASIC10.72□□□□□ -0.69
Sox2P48432 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.72□□□□□ -0.69
Sox2P48432 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.72□□□□□ -0.69
Sox2P48432 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.72□□□□□ -0.69
Sox2P48432 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.72□□□□□ -0.69
Sox2P48432 Gzmn-202ENSMUST00000225535 989 ntBASIC10.72□□□□□ -0.69
Sox2P48432 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.72□□□□□ -0.69
Sox2P48432 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.72□□□□□ -0.69
Sox2P48432 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.72□□□□□ -0.69
Sox2P48432 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.72□□□□□ -0.69
Sox2P48432 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Sox2P48432 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox2P48432 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms