Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CISHQ9NSE2 KRT8P29-201ENST00000420409 1371 ntBASIC15.6■□□□□ 0.09
CISHQ9NSE2 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CISHQ9NSE2 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
CISHQ9NSE2 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CISHQ9NSE2 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CISHQ9NSE2 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CISHQ9NSE2 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CISHQ9NSE2 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CISHQ9NSE2 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CISHQ9NSE2 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CISHQ9NSE2 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CISHQ9NSE2 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.59■□□□□ 0.09
CISHQ9NSE2 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CISHQ9NSE2 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CISHQ9NSE2 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.59■□□□□ 0.09
CISHQ9NSE2 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CISHQ9NSE2 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.59■□□□□ 0.09
CISHQ9NSE2 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CISHQ9NSE2 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CISHQ9NSE2 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.59■□□□□ 0.09
CISHQ9NSE2 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CISHQ9NSE2 BRWD1P1-201ENST00000401091 371 ntBASIC15.59■□□□□ 0.09
CISHQ9NSE2 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.59■□□□□ 0.09
CISHQ9NSE2 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.59■□□□□ 0.09
CISHQ9NSE2 AL161932.2-201ENST00000435436 679 ntBASIC15.59■□□□□ 0.09
CISHQ9NSE2 POM121L10P-201ENST00000436994 1285 ntBASIC15.59■□□□□ 0.09
CISHQ9NSE2 RNMTL1P1-201ENST00000454103 560 ntBASIC15.59■□□□□ 0.09
CISHQ9NSE2 TUBB8P8-201ENST00000458717 1058 ntBASIC15.59■□□□□ 0.09
CISHQ9NSE2 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.59■□□□□ 0.09
CISHQ9NSE2 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CISHQ9NSE2 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CISHQ9NSE2 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CISHQ9NSE2 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.59■□□□□ 0.09
CISHQ9NSE2 AC005586.2-201ENST00000563946 837 ntBASIC15.59■□□□□ 0.09
CISHQ9NSE2 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.59■□□□□ 0.09
CISHQ9NSE2 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.59■□□□□ 0.09
CISHQ9NSE2 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.59■□□□□ 0.09
CISHQ9NSE2 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CISHQ9NSE2 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CISHQ9NSE2 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CISHQ9NSE2 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CISHQ9NSE2 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.59■□□□□ 0.09
CISHQ9NSE2 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CISHQ9NSE2 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CISHQ9NSE2 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CISHQ9NSE2 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CISHQ9NSE2 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CISHQ9NSE2 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CISHQ9NSE2 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CISHQ9NSE2 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CISHQ9NSE2 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CISHQ9NSE2 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CISHQ9NSE2 AC018735.1-201ENST00000437208 1502 ntBASIC15.58■□□□□ 0.09
CISHQ9NSE2 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CISHQ9NSE2 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CISHQ9NSE2 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CISHQ9NSE2 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
CISHQ9NSE2 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.58■□□□□ 0.09
CISHQ9NSE2 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.58■□□□□ 0.09
CISHQ9NSE2 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CISHQ9NSE2 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.58■□□□□ 0.08
CISHQ9NSE2 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CISHQ9NSE2 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CISHQ9NSE2 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CISHQ9NSE2 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CISHQ9NSE2 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CISHQ9NSE2 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CISHQ9NSE2 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CISHQ9NSE2 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CISHQ9NSE2 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.58■□□□□ 0.08
CISHQ9NSE2 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.58■□□□□ 0.08
CISHQ9NSE2 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CISHQ9NSE2 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.58■□□□□ 0.08
CISHQ9NSE2 FAM8A2P-201ENST00000528813 1142 ntBASIC15.58■□□□□ 0.08
CISHQ9NSE2 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CISHQ9NSE2 AL160314.3-201ENST00000556041 767 ntBASIC15.58■□□□□ 0.08
CISHQ9NSE2 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.58■□□□□ 0.08
CISHQ9NSE2 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.58■□□□□ 0.08
CISHQ9NSE2 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.58■□□□□ 0.08
CISHQ9NSE2 AC005324.6-201ENST00000587972 613 ntBASIC15.58■□□□□ 0.08
CISHQ9NSE2 AC007663.3-201ENST00000609632 465 ntBASIC15.58■□□□□ 0.08
CISHQ9NSE2 AL023803.2-201ENST00000620080 638 ntBASIC15.58■□□□□ 0.08
CISHQ9NSE2 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.58■□□□□ 0.08
CISHQ9NSE2 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.58■□□□□ 0.08
CISHQ9NSE2 AC064801.2-201ENST00000625052 1303 ntBASIC15.58■□□□□ 0.08
CISHQ9NSE2 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.58■□□□□ 0.08
CISHQ9NSE2 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CISHQ9NSE2 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.58■□□□□ 0.08
CISHQ9NSE2 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.58■□□□□ 0.08
CISHQ9NSE2 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CISHQ9NSE2 MBLAC2-202ENST00000514906 1936 ntBASIC15.58■□□□□ 0.08
CISHQ9NSE2 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CISHQ9NSE2 AL136379.1-201ENST00000623471 2642 ntBASIC15.58■□□□□ 0.08
CISHQ9NSE2 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.58■□□□□ 0.08
CISHQ9NSE2 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CISHQ9NSE2 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.58■□□□□ 0.08
CISHQ9NSE2 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CISHQ9NSE2 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CISHQ9NSE2 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms