Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Tpm1P58771 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm1P58771 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Tpm1P58771 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Tpm1P58771 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC12.83□□□□□ -0.36
Tpm1P58771 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm1P58771 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm1P58771 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm1P58771 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Tpm1P58771 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm1P58771 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Tpm1P58771 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm1P58771 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Tpm1P58771 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm1P58771 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.82□□□□□ -0.36
Tpm1P58771 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm1P58771 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm1P58771 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm1P58771 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.82□□□□□ -0.36
Tpm1P58771 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm1P58771 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Tpm1P58771 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Tpm1P58771 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Tpm1P58771 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm1P58771 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm1P58771 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm1P58771 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm1P58771 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.82□□□□□ -0.36
Tpm1P58771 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.82□□□□□ -0.36
Tpm1P58771 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm1P58771 Lect2-202ENSMUST00000225183 823 ntBASIC12.82□□□□□ -0.36
Tpm1P58771 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.82□□□□□ -0.36
Tpm1P58771 Gm10254-201ENSMUST00000052888 867 ntBASIC12.82□□□□□ -0.36
Tpm1P58771 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm1P58771 Gm10312-201ENSMUST00000078515 489 ntBASIC12.82□□□□□ -0.36
Tpm1P58771 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Tpm1P58771 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.82□□□□□ -0.36
Tpm1P58771 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Tpm1P58771 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm1P58771 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm1P58771 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm1P58771 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.82□□□□□ -0.36
Tpm1P58771 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm1P58771 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Tpm1P58771 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Tpm1P58771 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Tpm1P58771 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Tpm1P58771 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm1P58771 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm1P58771 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm1P58771 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm1P58771 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Tpm1P58771 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Tpm1P58771 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm1P58771 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm1P58771 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Tpm1P58771 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm1P58771 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm1P58771 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm1P58771 Gm19327-201ENSMUST00000220651 3271 ntBASIC12.81□□□□□ -0.36
Tpm1P58771 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm1P58771 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC12.81□□□□□ -0.36
Tpm1P58771 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm1P58771 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm1P58771 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm1P58771 Gm14660-201ENSMUST00000119809 575 ntBASIC12.81□□□□□ -0.36
Tpm1P58771 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.81□□□□□ -0.36
Tpm1P58771 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Tpm1P58771 Gm8602-201ENSMUST00000184045 607 ntBASIC12.81□□□□□ -0.36
Tpm1P58771 Gm5370-201ENSMUST00000187187 574 ntBASIC12.81□□□□□ -0.36
Tpm1P58771 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Tpm1P58771 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm1P58771 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.81□□□□□ -0.36
Tpm1P58771 Gm5950-201ENSMUST00000213337 772 ntBASIC12.81□□□□□ -0.36
Tpm1P58771 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC12.81□□□□□ -0.36
Tpm1P58771 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm1P58771 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Tpm1P58771 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm1P58771 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm1P58771 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm1P58771 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm1P58771 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm1P58771 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Tpm1P58771 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm1P58771 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm1P58771 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.81□□□□□ -0.36
Tpm1P58771 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Tpm1P58771 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm1P58771 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Tpm1P58771 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm1P58771 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.81□□□□□ -0.36
Tpm1P58771 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.8□□□□□ -0.36
Tpm1P58771 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC12.8□□□□□ -0.36
Tpm1P58771 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tpm1P58771 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Tpm1P58771 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tpm1P58771 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tpm1P58771 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tpm1P58771 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Tpm1P58771 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms