Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Gm8343-201ENSMUST00000182705 994 ntBASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Ighv1-48-201ENSMUST00000191795 294 ntBASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Gm2965-201ENSMUST00000198365 343 ntBASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Gm45398-201ENSMUST00000210561 165 ntBASIC13.47□□□□□ -0.25
Vps53Q8CCB4 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.47□□□□□ -0.25
Vps53Q8CCB4 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps53Q8CCB4 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps53Q8CCB4 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps53Q8CCB4 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps53Q8CCB4 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.46□□□□□ -0.25
Vps53Q8CCB4 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Vps53Q8CCB4 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Vps53Q8CCB4 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13.46□□□□□ -0.25
Vps53Q8CCB4 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps53Q8CCB4 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps53Q8CCB4 Gm12857-201ENSMUST00000117678 592 ntBASIC13.46□□□□□ -0.25
Vps53Q8CCB4 Gm16397-201ENSMUST00000122201 494 ntBASIC13.46□□□□□ -0.25
Vps53Q8CCB4 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC13.46□□□□□ -0.25
Vps53Q8CCB4 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Vps53Q8CCB4 Mir7686-201ENSMUST00000200604 57 ntBASIC13.46□□□□□ -0.25
Vps53Q8CCB4 Gm9132-201ENSMUST00000210182 832 ntBASIC13.46□□□□□ -0.25
Vps53Q8CCB4 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Vps53Q8CCB4 CT485607.1-201ENSMUST00000216100 85 ntBASIC13.46□□□□□ -0.25
Vps53Q8CCB4 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps53Q8CCB4 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps53Q8CCB4 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Vps53Q8CCB4 Gm10288-201ENSMUST00000084614 537 ntBASIC13.46□□□□□ -0.25
Vps53Q8CCB4 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps53Q8CCB4 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps53Q8CCB4 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Vps53Q8CCB4 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps53Q8CCB4 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Vps53Q8CCB4 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps53Q8CCB4 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Vps53Q8CCB4 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vps53Q8CCB4 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC13.46□□□□□ -0.26
Vps53Q8CCB4 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vps53Q8CCB4 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Vps53Q8CCB4 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vps53Q8CCB4 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vps53Q8CCB4 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Vps53Q8CCB4 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Gm13809-201ENSMUST00000117921 597 ntBASIC13.45□□□□□ -0.26
Vps53Q8CCB4 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps53Q8CCB4 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Gm6397-201ENSMUST00000161973 1069 ntBASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Gm9358-201ENSMUST00000183067 927 ntBASIC13.45□□□□□ -0.26
Vps53Q8CCB4 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms