Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Gm42432-201ENSMUST00000197902 1617 ntBASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Gm8111-201ENSMUST00000117659 987 ntBASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Gm15329-201ENSMUST00000121408 155 ntBASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 CT030166.5-201ENSMUST00000222249 420 ntBASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Gm14132-201ENSMUST00000117188 1719 ntBASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Gm23595-201ENSMUST00000104306 130 ntBASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 AC156790.2-201ENSMUST00000227115 568 ntBASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Gm12418-201ENSMUST00000118116 942 ntBASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 AA623943-201ENSMUST00000121794 354 ntBASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Gm9204-201ENSMUST00000212641 947 ntBASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Rps3a2-201ENSMUST00000074245 792 ntBASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Rps3a3-201ENSMUST00000074680 795 ntBASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Gm5740-201ENSMUST00000211003 1857 ntBASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ttc28Q80XJ3 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms