Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Cldn3Q9Z0G9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn3Q9Z0G9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn3Q9Z0G9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
Cldn3Q9Z0G9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn3Q9Z0G9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn3Q9Z0G9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn3Q9Z0G9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn3Q9Z0G9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Cldn3Q9Z0G9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn3Q9Z0G9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn3Q9Z0G9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn3Q9Z0G9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn3Q9Z0G9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn3Q9Z0G9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn3Q9Z0G9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn3Q9Z0G9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn3Q9Z0G9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn3Q9Z0G9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn3Q9Z0G9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Cldn3Q9Z0G9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cldn3Q9Z0G9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cldn3Q9Z0G9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn3Q9Z0G9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn3Q9Z0G9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn3Q9Z0G9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn3Q9Z0G9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn3Q9Z0G9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn3Q9Z0G9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Cldn3Q9Z0G9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn3Q9Z0G9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.63■□□□□ 0.89
Cldn3Q9Z0G9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cldn3Q9Z0G9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.63■□□□□ 0.89
Cldn3Q9Z0G9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.63■□□□□ 0.89
Cldn3Q9Z0G9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn3Q9Z0G9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn3Q9Z0G9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn3Q9Z0G9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cldn3Q9Z0G9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cldn3Q9Z0G9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cldn3Q9Z0G9 Gm22238-201ENSMUST00000175222 88 ntBASIC20.62■□□□□ 0.89
Cldn3Q9Z0G9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cldn3Q9Z0G9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.61■□□□□ 0.89
Cldn3Q9Z0G9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn3Q9Z0G9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Cldn3Q9Z0G9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.61■□□□□ 0.89
Cldn3Q9Z0G9 Gm7143-201ENSMUST00000222811 859 ntBASIC20.61■□□□□ 0.89
Cldn3Q9Z0G9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn3Q9Z0G9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn3Q9Z0G9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn3Q9Z0G9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn3Q9Z0G9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.61■□□□□ 0.89
Cldn3Q9Z0G9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn3Q9Z0G9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn3Q9Z0G9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn3Q9Z0G9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn3Q9Z0G9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.6■□□□□ 0.89
Cldn3Q9Z0G9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.6■□□□□ 0.89
Cldn3Q9Z0G9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn3Q9Z0G9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Cldn3Q9Z0G9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn3Q9Z0G9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.6■□□□□ 0.89
Cldn3Q9Z0G9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn3Q9Z0G9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn3Q9Z0G9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.6■□□□□ 0.89
Cldn3Q9Z0G9 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.6■□□□□ 0.89
Cldn3Q9Z0G9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn3Q9Z0G9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.59■□□□□ 0.89
Cldn3Q9Z0G9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Cldn3Q9Z0G9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Cldn3Q9Z0G9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn3Q9Z0G9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn3Q9Z0G9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn3Q9Z0G9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn3Q9Z0G9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cldn3Q9Z0G9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cldn3Q9Z0G9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cldn3Q9Z0G9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Cldn3Q9Z0G9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
Cldn3Q9Z0G9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cldn3Q9Z0G9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cldn3Q9Z0G9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
Cldn3Q9Z0G9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cldn3Q9Z0G9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cldn3Q9Z0G9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.57■□□□□ 0.88
Cldn3Q9Z0G9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.57■□□□□ 0.88
Cldn3Q9Z0G9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Cldn3Q9Z0G9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Cldn3Q9Z0G9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cldn3Q9Z0G9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cldn3Q9Z0G9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn3Q9Z0G9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn3Q9Z0G9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn3Q9Z0G9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn3Q9Z0G9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.56■□□□□ 0.88
Cldn3Q9Z0G9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.56■□□□□ 0.88
Cldn3Q9Z0G9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn3Q9Z0G9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn3Q9Z0G9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn3Q9Z0G9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms