Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
5530400C23RikQ9D3I0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
5530400C23RikQ9D3I0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
5530400C23RikQ9D3I0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
5530400C23RikQ9D3I0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
5530400C23RikQ9D3I0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.04■□□□□ 0.8
5530400C23RikQ9D3I0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
5530400C23RikQ9D3I0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
5530400C23RikQ9D3I0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.04■□□□□ 0.8
5530400C23RikQ9D3I0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
5530400C23RikQ9D3I0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.03■□□□□ 0.8
5530400C23RikQ9D3I0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
5530400C23RikQ9D3I0 Gm14117-201ENSMUST00000122417 843 ntBASIC20.03■□□□□ 0.8
5530400C23RikQ9D3I0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
5530400C23RikQ9D3I0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
5530400C23RikQ9D3I0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
5530400C23RikQ9D3I0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
5530400C23RikQ9D3I0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
5530400C23RikQ9D3I0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
5530400C23RikQ9D3I0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
5530400C23RikQ9D3I0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.02■□□□□ 0.8
5530400C23RikQ9D3I0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
5530400C23RikQ9D3I0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
5530400C23RikQ9D3I0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
5530400C23RikQ9D3I0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
5530400C23RikQ9D3I0 Gm45102-201ENSMUST00000207427 857 ntBASIC20.01■□□□□ 0.79
5530400C23RikQ9D3I0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
5530400C23RikQ9D3I0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.01■□□□□ 0.79
5530400C23RikQ9D3I0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
5530400C23RikQ9D3I0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20■□□□□ 0.79
5530400C23RikQ9D3I0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
5530400C23RikQ9D3I0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20■□□□□ 0.79
5530400C23RikQ9D3I0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20■□□□□ 0.79
5530400C23RikQ9D3I0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
5530400C23RikQ9D3I0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20■□□□□ 0.79
5530400C23RikQ9D3I0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
5530400C23RikQ9D3I0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
5530400C23RikQ9D3I0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.99■□□□□ 0.79
5530400C23RikQ9D3I0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
5530400C23RikQ9D3I0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
5530400C23RikQ9D3I0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
5530400C23RikQ9D3I0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
5530400C23RikQ9D3I0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
5530400C23RikQ9D3I0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
5530400C23RikQ9D3I0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
5530400C23RikQ9D3I0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
5530400C23RikQ9D3I0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
5530400C23RikQ9D3I0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
5530400C23RikQ9D3I0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.99■□□□□ 0.79
5530400C23RikQ9D3I0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
5530400C23RikQ9D3I0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
5530400C23RikQ9D3I0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
5530400C23RikQ9D3I0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
5530400C23RikQ9D3I0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
5530400C23RikQ9D3I0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
5530400C23RikQ9D3I0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
5530400C23RikQ9D3I0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
5530400C23RikQ9D3I0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.98■□□□□ 0.79
5530400C23RikQ9D3I0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.98■□□□□ 0.79
5530400C23RikQ9D3I0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
5530400C23RikQ9D3I0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
5530400C23RikQ9D3I0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
5530400C23RikQ9D3I0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
5530400C23RikQ9D3I0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
5530400C23RikQ9D3I0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
5530400C23RikQ9D3I0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
5530400C23RikQ9D3I0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
5530400C23RikQ9D3I0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
5530400C23RikQ9D3I0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
5530400C23RikQ9D3I0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
5530400C23RikQ9D3I0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
5530400C23RikQ9D3I0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
5530400C23RikQ9D3I0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
5530400C23RikQ9D3I0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
5530400C23RikQ9D3I0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
5530400C23RikQ9D3I0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
5530400C23RikQ9D3I0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
5530400C23RikQ9D3I0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.96■□□□□ 0.79
5530400C23RikQ9D3I0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
5530400C23RikQ9D3I0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
5530400C23RikQ9D3I0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
5530400C23RikQ9D3I0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.96■□□□□ 0.79
5530400C23RikQ9D3I0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
5530400C23RikQ9D3I0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
5530400C23RikQ9D3I0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
5530400C23RikQ9D3I0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
5530400C23RikQ9D3I0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
5530400C23RikQ9D3I0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.95■□□□□ 0.78
5530400C23RikQ9D3I0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
5530400C23RikQ9D3I0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
5530400C23RikQ9D3I0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
5530400C23RikQ9D3I0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
5530400C23RikQ9D3I0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
5530400C23RikQ9D3I0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
5530400C23RikQ9D3I0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
5530400C23RikQ9D3I0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
5530400C23RikQ9D3I0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
5530400C23RikQ9D3I0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
5530400C23RikQ9D3I0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
5530400C23RikQ9D3I0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms