Protein–RNA interactions for Protein: Q9CQ82

Itgb3bp, Centromere protein R, mousemouse

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3bpQ9CQ82 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.77■□□□□ 0.6
Itgb3bpQ9CQ82 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.77■□□□□ 0.6
Itgb3bpQ9CQ82 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Itgb3bpQ9CQ82 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.77■□□□□ 0.6
Itgb3bpQ9CQ82 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Itgb3bpQ9CQ82 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Itgb3bpQ9CQ82 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Itgb3bpQ9CQ82 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Itgb3bpQ9CQ82 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Itgb3bpQ9CQ82 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Itgb3bpQ9CQ82 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.76■□□□□ 0.59
Itgb3bpQ9CQ82 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Itgb3bpQ9CQ82 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.76■□□□□ 0.59
Itgb3bpQ9CQ82 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Itgb3bpQ9CQ82 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Itgb3bpQ9CQ82 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Itgb3bpQ9CQ82 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Itgb3bpQ9CQ82 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Itgb3bpQ9CQ82 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Itgb3bpQ9CQ82 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Itgb3bpQ9CQ82 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Itgb3bpQ9CQ82 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Itgb3bpQ9CQ82 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Itgb3bpQ9CQ82 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.75■□□□□ 0.59
Itgb3bpQ9CQ82 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Itgb3bpQ9CQ82 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Itgb3bpQ9CQ82 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Itgb3bpQ9CQ82 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Itgb3bpQ9CQ82 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Itgb3bpQ9CQ82 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Itgb3bpQ9CQ82 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Itgb3bpQ9CQ82 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Itgb3bpQ9CQ82 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Itgb3bpQ9CQ82 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.74■□□□□ 0.59
Itgb3bpQ9CQ82 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.74■□□□□ 0.59
Itgb3bpQ9CQ82 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Itgb3bpQ9CQ82 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Itgb3bpQ9CQ82 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Itgb3bpQ9CQ82 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Itgb3bpQ9CQ82 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Itgb3bpQ9CQ82 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Itgb3bpQ9CQ82 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Itgb3bpQ9CQ82 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Itgb3bpQ9CQ82 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Itgb3bpQ9CQ82 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Itgb3bpQ9CQ82 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Itgb3bpQ9CQ82 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Itgb3bpQ9CQ82 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Itgb3bpQ9CQ82 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Itgb3bpQ9CQ82 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Itgb3bpQ9CQ82 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Itgb3bpQ9CQ82 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Itgb3bpQ9CQ82 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Itgb3bpQ9CQ82 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Itgb3bpQ9CQ82 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Itgb3bpQ9CQ82 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Itgb3bpQ9CQ82 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Itgb3bpQ9CQ82 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Itgb3bpQ9CQ82 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Itgb3bpQ9CQ82 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Itgb3bpQ9CQ82 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.71■□□□□ 0.59
Itgb3bpQ9CQ82 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Itgb3bpQ9CQ82 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Itgb3bpQ9CQ82 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.71■□□□□ 0.59
Itgb3bpQ9CQ82 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Itgb3bpQ9CQ82 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Itgb3bpQ9CQ82 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Itgb3bpQ9CQ82 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Itgb3bpQ9CQ82 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Itgb3bpQ9CQ82 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Itgb3bpQ9CQ82 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Itgb3bpQ9CQ82 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Itgb3bpQ9CQ82 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Itgb3bpQ9CQ82 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Itgb3bpQ9CQ82 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Itgb3bpQ9CQ82 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Itgb3bpQ9CQ82 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Itgb3bpQ9CQ82 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Itgb3bpQ9CQ82 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Itgb3bpQ9CQ82 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Itgb3bpQ9CQ82 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Itgb3bpQ9CQ82 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Itgb3bpQ9CQ82 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Itgb3bpQ9CQ82 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.68■□□□□ 0.58
Itgb3bpQ9CQ82 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.68■□□□□ 0.58
Itgb3bpQ9CQ82 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Itgb3bpQ9CQ82 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Itgb3bpQ9CQ82 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Itgb3bpQ9CQ82 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Itgb3bpQ9CQ82 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Itgb3bpQ9CQ82 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb3bpQ9CQ82 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Itgb3bpQ9CQ82 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb3bpQ9CQ82 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Itgb3bpQ9CQ82 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Itgb3bpQ9CQ82 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.67■□□□□ 0.58
Itgb3bpQ9CQ82 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb3bpQ9CQ82 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb3bpQ9CQ82 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Itgb3bpQ9CQ82 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms