Protein–RNA interactions for Protein: Q91Y06

Pcdhb13, Protocadherin beta 13, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb13Q91Y06 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb13Q91Y06 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb13Q91Y06 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Pcdhb13Q91Y06 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb13Q91Y06 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb13Q91Y06 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb13Q91Y06 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb13Q91Y06 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb13Q91Y06 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb13Q91Y06 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb13Q91Y06 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb13Q91Y06 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb13Q91Y06 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb13Q91Y06 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb13Q91Y06 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.59■□□□□ 0.89
Pcdhb13Q91Y06 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.59■□□□□ 0.89
Pcdhb13Q91Y06 Gm15820-201ENSMUST00000201566 728 ntBASIC20.59■□□□□ 0.89
Pcdhb13Q91Y06 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb13Q91Y06 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Pcdhb13Q91Y06 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb13Q91Y06 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb13Q91Y06 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Pcdhb13Q91Y06 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb13Q91Y06 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb13Q91Y06 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb13Q91Y06 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb13Q91Y06 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Pcdhb13Q91Y06 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.58■□□□□ 0.89
Pcdhb13Q91Y06 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhb13Q91Y06 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhb13Q91Y06 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Pcdhb13Q91Y06 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb13Q91Y06 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb13Q91Y06 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb13Q91Y06 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb13Q91Y06 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb13Q91Y06 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb13Q91Y06 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb13Q91Y06 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb13Q91Y06 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb13Q91Y06 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb13Q91Y06 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.56■□□□□ 0.88
Pcdhb13Q91Y06 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb13Q91Y06 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Pcdhb13Q91Y06 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb13Q91Y06 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.56■□□□□ 0.88
Pcdhb13Q91Y06 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb13Q91Y06 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb13Q91Y06 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb13Q91Y06 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb13Q91Y06 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb13Q91Y06 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb13Q91Y06 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Pcdhb13Q91Y06 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.55■□□□□ 0.88
Pcdhb13Q91Y06 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.54■□□□□ 0.88
Pcdhb13Q91Y06 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.54■□□□□ 0.88
Pcdhb13Q91Y06 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb13Q91Y06 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb13Q91Y06 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb13Q91Y06 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb13Q91Y06 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Pcdhb13Q91Y06 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.53■□□□□ 0.88
Pcdhb13Q91Y06 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.53■□□□□ 0.88
Pcdhb13Q91Y06 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb13Q91Y06 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Pcdhb13Q91Y06 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb13Q91Y06 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb13Q91Y06 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb13Q91Y06 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb13Q91Y06 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb13Q91Y06 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb13Q91Y06 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb13Q91Y06 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.52■□□□□ 0.88
Pcdhb13Q91Y06 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb13Q91Y06 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb13Q91Y06 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb13Q91Y06 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.52■□□□□ 0.88
Pcdhb13Q91Y06 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb13Q91Y06 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Pcdhb13Q91Y06 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb13Q91Y06 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhb13Q91Y06 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.52■□□□□ 0.87
Pcdhb13Q91Y06 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhb13Q91Y06 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhb13Q91Y06 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb13Q91Y06 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb13Q91Y06 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Pcdhb13Q91Y06 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb13Q91Y06 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb13Q91Y06 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb13Q91Y06 Gm15546-201ENSMUST00000122095 826 ntBASIC20.51■□□□□ 0.87
Pcdhb13Q91Y06 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb13Q91Y06 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.51■□□□□ 0.87
Pcdhb13Q91Y06 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb13Q91Y06 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb13Q91Y06 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb13Q91Y06 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Pcdhb13Q91Y06 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb13Q91Y06 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb13Q91Y06 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms