Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhga9Q91XX9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Pcdhga9Q91XX9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhga9Q91XX9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.23■□□□□ 0.83
Pcdhga9Q91XX9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhga9Q91XX9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Pcdhga9Q91XX9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.23■□□□□ 0.83
Pcdhga9Q91XX9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhga9Q91XX9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhga9Q91XX9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhga9Q91XX9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhga9Q91XX9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhga9Q91XX9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhga9Q91XX9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhga9Q91XX9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhga9Q91XX9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhga9Q91XX9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhga9Q91XX9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Pcdhga9Q91XX9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhga9Q91XX9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhga9Q91XX9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhga9Q91XX9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhga9Q91XX9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhga9Q91XX9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhga9Q91XX9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhga9Q91XX9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhga9Q91XX9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhga9Q91XX9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhga9Q91XX9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Pcdhga9Q91XX9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhga9Q91XX9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhga9Q91XX9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhga9Q91XX9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Pcdhga9Q91XX9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhga9Q91XX9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhga9Q91XX9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhga9Q91XX9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhga9Q91XX9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhga9Q91XX9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhga9Q91XX9 Gm12922-201ENSMUST00000120626 809 ntBASIC20.17■□□□□ 0.82
Pcdhga9Q91XX9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhga9Q91XX9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.17■□□□□ 0.82
Pcdhga9Q91XX9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhga9Q91XX9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.16■□□□□ 0.82
Pcdhga9Q91XX9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhga9Q91XX9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.16■□□□□ 0.82
Pcdhga9Q91XX9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Pcdhga9Q91XX9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhga9Q91XX9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhga9Q91XX9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.16■□□□□ 0.82
Pcdhga9Q91XX9 Gm21956-201ENSMUST00000179946 522 ntBASIC20.16■□□□□ 0.82
Pcdhga9Q91XX9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.16■□□□□ 0.82
Pcdhga9Q91XX9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhga9Q91XX9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhga9Q91XX9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhga9Q91XX9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Pcdhga9Q91XX9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhga9Q91XX9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhga9Q91XX9 Gm7143-201ENSMUST00000222811 859 ntBASIC20.15■□□□□ 0.82
Pcdhga9Q91XX9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.15■□□□□ 0.82
Pcdhga9Q91XX9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhga9Q91XX9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhga9Q91XX9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Pcdhga9Q91XX9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhga9Q91XX9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pcdhga9Q91XX9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhga9Q91XX9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhga9Q91XX9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhga9Q91XX9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhga9Q91XX9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.14■□□□□ 0.81
Pcdhga9Q91XX9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhga9Q91XX9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhga9Q91XX9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhga9Q91XX9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhga9Q91XX9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Pcdhga9Q91XX9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhga9Q91XX9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhga9Q91XX9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.13■□□□□ 0.81
Pcdhga9Q91XX9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhga9Q91XX9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Pcdhga9Q91XX9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhga9Q91XX9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhga9Q91XX9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
Pcdhga9Q91XX9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhga9Q91XX9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhga9Q91XX9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhga9Q91XX9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.13■□□□□ 0.81
Pcdhga9Q91XX9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Pcdhga9Q91XX9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhga9Q91XX9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhga9Q91XX9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhga9Q91XX9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhga9Q91XX9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhga9Q91XX9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.12■□□□□ 0.81
Pcdhga9Q91XX9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Pcdhga9Q91XX9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhga9Q91XX9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Pcdhga9Q91XX9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhga9Q91XX9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhga9Q91XX9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms