Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Pcdhb11Q91UZ8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb11Q91UZ8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Pcdhb11Q91UZ8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Pcdhb11Q91UZ8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb11Q91UZ8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb11Q91UZ8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Pcdhb11Q91UZ8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb11Q91UZ8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb11Q91UZ8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Pcdhb11Q91UZ8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb11Q91UZ8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb11Q91UZ8 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb11Q91UZ8 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb11Q91UZ8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb11Q91UZ8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Pcdhb11Q91UZ8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb11Q91UZ8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb11Q91UZ8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.94■□□□□ 0.94
Pcdhb11Q91UZ8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb11Q91UZ8 Gm7143-201ENSMUST00000222811 859 ntBASIC20.94■□□□□ 0.94
Pcdhb11Q91UZ8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.94■□□□□ 0.94
Pcdhb11Q91UZ8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb11Q91UZ8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb11Q91UZ8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb11Q91UZ8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb11Q91UZ8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb11Q91UZ8 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb11Q91UZ8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb11Q91UZ8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb11Q91UZ8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb11Q91UZ8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb11Q91UZ8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb11Q91UZ8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb11Q91UZ8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.92■□□□□ 0.94
Pcdhb11Q91UZ8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Pcdhb11Q91UZ8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb11Q91UZ8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
Pcdhb11Q91UZ8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Pcdhb11Q91UZ8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb11Q91UZ8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb11Q91UZ8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.91■□□□□ 0.94
Pcdhb11Q91UZ8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb11Q91UZ8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Pcdhb11Q91UZ8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.91■□□□□ 0.94
Pcdhb11Q91UZ8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb11Q91UZ8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb11Q91UZ8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb11Q91UZ8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb11Q91UZ8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb11Q91UZ8 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb11Q91UZ8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.9■□□□□ 0.94
Pcdhb11Q91UZ8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Pcdhb11Q91UZ8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.9■□□□□ 0.94
Pcdhb11Q91UZ8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb11Q91UZ8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb11Q91UZ8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb11Q91UZ8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb11Q91UZ8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.9■□□□□ 0.94
Pcdhb11Q91UZ8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb11Q91UZ8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhb11Q91UZ8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb11Q91UZ8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb11Q91UZ8 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.89■□□□□ 0.93
Pcdhb11Q91UZ8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.89■□□□□ 0.93
Pcdhb11Q91UZ8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
Pcdhb11Q91UZ8 Gm9870-201ENSMUST00000063874 645 ntBASIC20.89■□□□□ 0.93
Pcdhb11Q91UZ8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb11Q91UZ8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb11Q91UZ8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb11Q91UZ8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.88■□□□□ 0.93
Pcdhb11Q91UZ8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb11Q91UZ8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb11Q91UZ8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb11Q91UZ8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb11Q91UZ8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.88■□□□□ 0.93
Pcdhb11Q91UZ8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Pcdhb11Q91UZ8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.88■□□□□ 0.93
Pcdhb11Q91UZ8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb11Q91UZ8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb11Q91UZ8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
Pcdhb11Q91UZ8 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb11Q91UZ8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb11Q91UZ8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb11Q91UZ8 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb11Q91UZ8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb11Q91UZ8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb11Q91UZ8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb11Q91UZ8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
Pcdhb11Q91UZ8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.86■□□□□ 0.93
Pcdhb11Q91UZ8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
Pcdhb11Q91UZ8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb11Q91UZ8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb11Q91UZ8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Pcdhb11Q91UZ8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb11Q91UZ8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb11Q91UZ8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb11Q91UZ8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb11Q91UZ8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb11Q91UZ8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms