Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ndc1Q8VCB1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
Ndc1Q8VCB1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Ndc1Q8VCB1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ndc1Q8VCB1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ndc1Q8VCB1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ndc1Q8VCB1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ndc1Q8VCB1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ndc1Q8VCB1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ndc1Q8VCB1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.25■□□□□ 0.67
Ndc1Q8VCB1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ndc1Q8VCB1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ndc1Q8VCB1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ndc1Q8VCB1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ndc1Q8VCB1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ndc1Q8VCB1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ndc1Q8VCB1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ndc1Q8VCB1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ndc1Q8VCB1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ndc1Q8VCB1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ndc1Q8VCB1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ndc1Q8VCB1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.24■□□□□ 0.67
Ndc1Q8VCB1 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.24■□□□□ 0.67
Ndc1Q8VCB1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ndc1Q8VCB1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Ndc1Q8VCB1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ndc1Q8VCB1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ndc1Q8VCB1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ndc1Q8VCB1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.23■□□□□ 0.67
Ndc1Q8VCB1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.23■□□□□ 0.67
Ndc1Q8VCB1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.23■□□□□ 0.67
Ndc1Q8VCB1 Gm45417-201ENSMUST00000209533 758 ntBASIC19.23■□□□□ 0.67
Ndc1Q8VCB1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ndc1Q8VCB1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ndc1Q8VCB1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ndc1Q8VCB1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ndc1Q8VCB1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ndc1Q8VCB1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ndc1Q8VCB1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ndc1Q8VCB1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.22■□□□□ 0.67
Ndc1Q8VCB1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.22■□□□□ 0.67
Ndc1Q8VCB1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ndc1Q8VCB1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ndc1Q8VCB1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ndc1Q8VCB1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ndc1Q8VCB1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ndc1Q8VCB1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ndc1Q8VCB1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
Ndc1Q8VCB1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ndc1Q8VCB1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ndc1Q8VCB1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ndc1Q8VCB1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ndc1Q8VCB1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ndc1Q8VCB1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ndc1Q8VCB1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ndc1Q8VCB1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ndc1Q8VCB1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ndc1Q8VCB1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ndc1Q8VCB1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.2■□□□□ 0.66
Ndc1Q8VCB1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ndc1Q8VCB1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ndc1Q8VCB1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ndc1Q8VCB1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.2■□□□□ 0.66
Ndc1Q8VCB1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ndc1Q8VCB1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ndc1Q8VCB1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ndc1Q8VCB1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ndc1Q8VCB1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ndc1Q8VCB1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Ndc1Q8VCB1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ndc1Q8VCB1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ndc1Q8VCB1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ndc1Q8VCB1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ndc1Q8VCB1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ndc1Q8VCB1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ndc1Q8VCB1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ndc1Q8VCB1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ndc1Q8VCB1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ndc1Q8VCB1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ndc1Q8VCB1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ndc1Q8VCB1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Ndc1Q8VCB1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ndc1Q8VCB1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ndc1Q8VCB1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ndc1Q8VCB1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ndc1Q8VCB1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ndc1Q8VCB1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.17■□□□□ 0.66
Ndc1Q8VCB1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ndc1Q8VCB1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ndc1Q8VCB1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
Ndc1Q8VCB1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ndc1Q8VCB1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ndc1Q8VCB1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ndc1Q8VCB1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ndc1Q8VCB1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ndc1Q8VCB1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ndc1Q8VCB1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ndc1Q8VCB1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.15■□□□□ 0.66
Ndc1Q8VCB1 Gm7143-201ENSMUST00000222811 859 ntBASIC19.15■□□□□ 0.66
Ndc1Q8VCB1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms