Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Rftn2Q8CHX7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.84■■□□□ 1.09
Rftn2Q8CHX7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rftn2Q8CHX7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rftn2Q8CHX7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rftn2Q8CHX7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rftn2Q8CHX7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.83■■□□□ 1.09
Rftn2Q8CHX7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rftn2Q8CHX7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Rftn2Q8CHX7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rftn2Q8CHX7 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rftn2Q8CHX7 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Rftn2Q8CHX7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rftn2Q8CHX7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.82■■□□□ 1.08
Rftn2Q8CHX7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Rftn2Q8CHX7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rftn2Q8CHX7 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rftn2Q8CHX7 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rftn2Q8CHX7 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rftn2Q8CHX7 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rftn2Q8CHX7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rftn2Q8CHX7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Rftn2Q8CHX7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rftn2Q8CHX7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rftn2Q8CHX7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
Rftn2Q8CHX7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.81■■□□□ 1.08
Rftn2Q8CHX7 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Rftn2Q8CHX7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rftn2Q8CHX7 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Rftn2Q8CHX7 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Rftn2Q8CHX7 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rftn2Q8CHX7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rftn2Q8CHX7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.8■■□□□ 1.08
Rftn2Q8CHX7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Rftn2Q8CHX7 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rftn2Q8CHX7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rftn2Q8CHX7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Rftn2Q8CHX7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rftn2Q8CHX7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rftn2Q8CHX7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rftn2Q8CHX7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rftn2Q8CHX7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Rftn2Q8CHX7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rftn2Q8CHX7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rftn2Q8CHX7 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rftn2Q8CHX7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
Rftn2Q8CHX7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rftn2Q8CHX7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.78■■□□□ 1.08
Rftn2Q8CHX7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
Rftn2Q8CHX7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rftn2Q8CHX7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Rftn2Q8CHX7 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Rftn2Q8CHX7 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rftn2Q8CHX7 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rftn2Q8CHX7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rftn2Q8CHX7 Mir7075-201ENSMUST00000184187 82 ntBASIC21.77■■□□□ 1.08
Rftn2Q8CHX7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.77■■□□□ 1.08
Rftn2Q8CHX7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.77■■□□□ 1.08
Rftn2Q8CHX7 Gm6139-201ENSMUST00000079261 882 ntBASIC21.77■■□□□ 1.08
Rftn2Q8CHX7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Rftn2Q8CHX7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Rftn2Q8CHX7 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rftn2Q8CHX7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.76■■□□□ 1.07
Rftn2Q8CHX7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rftn2Q8CHX7 Serp2-204ENSMUST00000228055 705 ntBASIC21.76■■□□□ 1.07
Rftn2Q8CHX7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Rftn2Q8CHX7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rftn2Q8CHX7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Rftn2Q8CHX7 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rftn2Q8CHX7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rftn2Q8CHX7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rftn2Q8CHX7 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rftn2Q8CHX7 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Rftn2Q8CHX7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.75■■□□□ 1.07
Rftn2Q8CHX7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Rftn2Q8CHX7 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rftn2Q8CHX7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rftn2Q8CHX7 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rftn2Q8CHX7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rftn2Q8CHX7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rftn2Q8CHX7 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Rftn2Q8CHX7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rftn2Q8CHX7 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rftn2Q8CHX7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rftn2Q8CHX7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rftn2Q8CHX7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Rftn2Q8CHX7 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rftn2Q8CHX7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.73■■□□□ 1.07
Rftn2Q8CHX7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rftn2Q8CHX7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rftn2Q8CHX7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rftn2Q8CHX7 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Rftn2Q8CHX7 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.72■■□□□ 1.07
Rftn2Q8CHX7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rftn2Q8CHX7 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rftn2Q8CHX7 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rftn2Q8CHX7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.72■■□□□ 1.07
Rftn2Q8CHX7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.72■■□□□ 1.07
Rftn2Q8CHX7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Rftn2Q8CHX7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms