Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sfr1Q8BP27 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Sfr1Q8BP27 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sfr1Q8BP27 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sfr1Q8BP27 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sfr1Q8BP27 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.7■□□□□ 0.9
Sfr1Q8BP27 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sfr1Q8BP27 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Sfr1Q8BP27 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sfr1Q8BP27 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Sfr1Q8BP27 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.69■□□□□ 0.9
Sfr1Q8BP27 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Sfr1Q8BP27 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.69■□□□□ 0.9
Sfr1Q8BP27 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Sfr1Q8BP27 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sfr1Q8BP27 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sfr1Q8BP27 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Sfr1Q8BP27 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sfr1Q8BP27 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sfr1Q8BP27 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sfr1Q8BP27 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sfr1Q8BP27 Gm7143-201ENSMUST00000222811 859 ntBASIC20.68■□□□□ 0.9
Sfr1Q8BP27 Gm9870-201ENSMUST00000063874 645 ntBASIC20.68■□□□□ 0.9
Sfr1Q8BP27 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sfr1Q8BP27 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sfr1Q8BP27 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Sfr1Q8BP27 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Sfr1Q8BP27 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sfr1Q8BP27 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sfr1Q8BP27 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sfr1Q8BP27 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.67■□□□□ 0.9
Sfr1Q8BP27 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.67■□□□□ 0.9
Sfr1Q8BP27 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sfr1Q8BP27 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sfr1Q8BP27 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sfr1Q8BP27 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sfr1Q8BP27 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sfr1Q8BP27 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Sfr1Q8BP27 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sfr1Q8BP27 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.65■□□□□ 0.9
Sfr1Q8BP27 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sfr1Q8BP27 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sfr1Q8BP27 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sfr1Q8BP27 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sfr1Q8BP27 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.65■□□□□ 0.9
Sfr1Q8BP27 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sfr1Q8BP27 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Sfr1Q8BP27 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sfr1Q8BP27 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sfr1Q8BP27 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sfr1Q8BP27 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Sfr1Q8BP27 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sfr1Q8BP27 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sfr1Q8BP27 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Sfr1Q8BP27 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sfr1Q8BP27 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sfr1Q8BP27 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sfr1Q8BP27 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sfr1Q8BP27 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sfr1Q8BP27 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sfr1Q8BP27 Gm12922-201ENSMUST00000120626 809 ntBASIC20.63■□□□□ 0.89
Sfr1Q8BP27 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sfr1Q8BP27 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Sfr1Q8BP27 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.63■□□□□ 0.89
Sfr1Q8BP27 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sfr1Q8BP27 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sfr1Q8BP27 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sfr1Q8BP27 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sfr1Q8BP27 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sfr1Q8BP27 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sfr1Q8BP27 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.62■□□□□ 0.89
Sfr1Q8BP27 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.62■□□□□ 0.89
Sfr1Q8BP27 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sfr1Q8BP27 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.61■□□□□ 0.89
Sfr1Q8BP27 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sfr1Q8BP27 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Sfr1Q8BP27 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sfr1Q8BP27 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.61■□□□□ 0.89
Sfr1Q8BP27 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sfr1Q8BP27 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sfr1Q8BP27 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sfr1Q8BP27 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sfr1Q8BP27 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sfr1Q8BP27 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sfr1Q8BP27 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.6■□□□□ 0.89
Sfr1Q8BP27 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sfr1Q8BP27 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sfr1Q8BP27 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sfr1Q8BP27 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sfr1Q8BP27 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sfr1Q8BP27 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sfr1Q8BP27 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sfr1Q8BP27 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sfr1Q8BP27 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sfr1Q8BP27 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sfr1Q8BP27 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.59■□□□□ 0.89
Sfr1Q8BP27 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sfr1Q8BP27 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
Sfr1Q8BP27 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sfr1Q8BP27 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms