Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srrm4Q8BKA3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Srrm4Q8BKA3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Srrm4Q8BKA3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm4Q8BKA3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm4Q8BKA3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Srrm4Q8BKA3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm4Q8BKA3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm4Q8BKA3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
Srrm4Q8BKA3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm4Q8BKA3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm4Q8BKA3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.7■□□□□ 0.42
Srrm4Q8BKA3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm4Q8BKA3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm4Q8BKA3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm4Q8BKA3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm4Q8BKA3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm4Q8BKA3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Srrm4Q8BKA3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srrm4Q8BKA3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srrm4Q8BKA3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srrm4Q8BKA3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srrm4Q8BKA3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srrm4Q8BKA3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srrm4Q8BKA3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srrm4Q8BKA3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srrm4Q8BKA3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srrm4Q8BKA3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srrm4Q8BKA3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srrm4Q8BKA3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srrm4Q8BKA3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srrm4Q8BKA3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srrm4Q8BKA3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srrm4Q8BKA3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srrm4Q8BKA3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Srrm4Q8BKA3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Srrm4Q8BKA3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srrm4Q8BKA3 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.68■□□□□ 0.42
Srrm4Q8BKA3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.67■□□□□ 0.42
Srrm4Q8BKA3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Srrm4Q8BKA3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
Srrm4Q8BKA3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srrm4Q8BKA3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srrm4Q8BKA3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Srrm4Q8BKA3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Srrm4Q8BKA3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srrm4Q8BKA3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srrm4Q8BKA3 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.66■□□□□ 0.42
Srrm4Q8BKA3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Srrm4Q8BKA3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Srrm4Q8BKA3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Srrm4Q8BKA3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Srrm4Q8BKA3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Srrm4Q8BKA3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Srrm4Q8BKA3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Srrm4Q8BKA3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
Srrm4Q8BKA3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Srrm4Q8BKA3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Srrm4Q8BKA3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Srrm4Q8BKA3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Srrm4Q8BKA3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Srrm4Q8BKA3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Srrm4Q8BKA3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Srrm4Q8BKA3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Srrm4Q8BKA3 Iqck-206ENSMUST00000208658 2891 ntBASIC17.64■□□□□ 0.41
Srrm4Q8BKA3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Srrm4Q8BKA3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Srrm4Q8BKA3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.64■□□□□ 0.41
Srrm4Q8BKA3 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Srrm4Q8BKA3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Srrm4Q8BKA3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Srrm4Q8BKA3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Srrm4Q8BKA3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Srrm4Q8BKA3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Srrm4Q8BKA3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Srrm4Q8BKA3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Srrm4Q8BKA3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Srrm4Q8BKA3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Srrm4Q8BKA3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Srrm4Q8BKA3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.63■□□□□ 0.41
Srrm4Q8BKA3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Srrm4Q8BKA3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.62■□□□□ 0.41
Srrm4Q8BKA3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Srrm4Q8BKA3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Srrm4Q8BKA3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Srrm4Q8BKA3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Srrm4Q8BKA3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Srrm4Q8BKA3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Srrm4Q8BKA3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Srrm4Q8BKA3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Srrm4Q8BKA3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Srrm4Q8BKA3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
Srrm4Q8BKA3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.61■□□□□ 0.41
Srrm4Q8BKA3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Srrm4Q8BKA3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.61■□□□□ 0.41
Srrm4Q8BKA3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Srrm4Q8BKA3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Srrm4Q8BKA3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Srrm4Q8BKA3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Srrm4Q8BKA3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms