Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.07■□□□□ 0.8
Pcdh19Q80TF3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh19Q80TF3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh19Q80TF3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh19Q80TF3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh19Q80TF3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.07■□□□□ 0.8
Pcdh19Q80TF3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.07■□□□□ 0.8
Pcdh19Q80TF3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh19Q80TF3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Pcdh19Q80TF3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh19Q80TF3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh19Q80TF3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.06■□□□□ 0.8
Pcdh19Q80TF3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Pcdh19Q80TF3 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.06■□□□□ 0.8
Pcdh19Q80TF3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Pcdh19Q80TF3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh19Q80TF3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh19Q80TF3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh19Q80TF3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh19Q80TF3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh19Q80TF3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh19Q80TF3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcdh19Q80TF3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh19Q80TF3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh19Q80TF3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh19Q80TF3 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.05■□□□□ 0.8
Pcdh19Q80TF3 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.05■□□□□ 0.8
Pcdh19Q80TF3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh19Q80TF3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh19Q80TF3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh19Q80TF3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh19Q80TF3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh19Q80TF3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh19Q80TF3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.04■□□□□ 0.8
Pcdh19Q80TF3 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh19Q80TF3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh19Q80TF3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh19Q80TF3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh19Q80TF3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh19Q80TF3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.03■□□□□ 0.8
Pcdh19Q80TF3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Pcdh19Q80TF3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Pcdh19Q80TF3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh19Q80TF3 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.03■□□□□ 0.8
Pcdh19Q80TF3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh19Q80TF3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Pcdh19Q80TF3 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.03■□□□□ 0.8
Pcdh19Q80TF3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Pcdh19Q80TF3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh19Q80TF3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
Pcdh19Q80TF3 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh19Q80TF3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh19Q80TF3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh19Q80TF3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Pcdh19Q80TF3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh19Q80TF3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdh19Q80TF3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdh19Q80TF3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh19Q80TF3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh19Q80TF3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh19Q80TF3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh19Q80TF3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh19Q80TF3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh19Q80TF3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.01■□□□□ 0.79
Pcdh19Q80TF3 Gm43530-201ENSMUST00000195920 274 ntBASIC20.01■□□□□ 0.79
Pcdh19Q80TF3 Gm43137-201ENSMUST00000198052 594 ntBASIC20.01■□□□□ 0.79
Pcdh19Q80TF3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh19Q80TF3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh19Q80TF3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh19Q80TF3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh19Q80TF3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20■□□□□ 0.79
Pcdh19Q80TF3 Gm44949-201ENSMUST00000206423 1450 ntBASIC20■□□□□ 0.79
Pcdh19Q80TF3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh19Q80TF3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh19Q80TF3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh19Q80TF3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh19Q80TF3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdh19Q80TF3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh19Q80TF3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh19Q80TF3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdh19Q80TF3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20■□□□□ 0.79
Pcdh19Q80TF3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh19Q80TF3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Pcdh19Q80TF3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh19Q80TF3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh19Q80TF3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh19Q80TF3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.99■□□□□ 0.79
Pcdh19Q80TF3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh19Q80TF3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh19Q80TF3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.99■□□□□ 0.79
Pcdh19Q80TF3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh19Q80TF3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Pcdh19Q80TF3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh19Q80TF3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh19Q80TF3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh19Q80TF3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Pcdh19Q80TF3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh19Q80TF3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh19Q80TF3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Pcdh19Q80TF3 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms