Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rif1Q6PR54 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Rif1Q6PR54 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rif1Q6PR54 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rif1Q6PR54 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rif1Q6PR54 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.43■□□□□ 0.38
Rif1Q6PR54 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.43■□□□□ 0.38
Rif1Q6PR54 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Rif1Q6PR54 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rif1Q6PR54 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rif1Q6PR54 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rif1Q6PR54 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.43■□□□□ 0.38
Rif1Q6PR54 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rif1Q6PR54 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.43■□□□□ 0.38
Rif1Q6PR54 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rif1Q6PR54 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rif1Q6PR54 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rif1Q6PR54 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rif1Q6PR54 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rif1Q6PR54 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rif1Q6PR54 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rif1Q6PR54 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rif1Q6PR54 Gm25925-201ENSMUST00000158314 306 ntBASIC17.42■□□□□ 0.38
Rif1Q6PR54 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rif1Q6PR54 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rif1Q6PR54 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rif1Q6PR54 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rif1Q6PR54 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rif1Q6PR54 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.42■□□□□ 0.38
Rif1Q6PR54 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.42■□□□□ 0.38
Rif1Q6PR54 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rif1Q6PR54 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rif1Q6PR54 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rif1Q6PR54 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rif1Q6PR54 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rif1Q6PR54 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rif1Q6PR54 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Rif1Q6PR54 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rif1Q6PR54 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rif1Q6PR54 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rif1Q6PR54 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rif1Q6PR54 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.41■□□□□ 0.38
Rif1Q6PR54 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Rif1Q6PR54 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rif1Q6PR54 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Rif1Q6PR54 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rif1Q6PR54 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rif1Q6PR54 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rif1Q6PR54 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.4■□□□□ 0.38
Rif1Q6PR54 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.4■□□□□ 0.38
Rif1Q6PR54 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rif1Q6PR54 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rif1Q6PR54 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rif1Q6PR54 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rif1Q6PR54 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.4■□□□□ 0.38
Rif1Q6PR54 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rif1Q6PR54 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Rif1Q6PR54 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rif1Q6PR54 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.39■□□□□ 0.37
Rif1Q6PR54 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.39■□□□□ 0.37
Rif1Q6PR54 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rif1Q6PR54 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rif1Q6PR54 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rif1Q6PR54 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rif1Q6PR54 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.39■□□□□ 0.37
Rif1Q6PR54 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rif1Q6PR54 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rif1Q6PR54 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.39■□□□□ 0.37
Rif1Q6PR54 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rif1Q6PR54 Gm15565-201ENSMUST00000118890 427 ntBASIC17.39■□□□□ 0.37
Rif1Q6PR54 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rif1Q6PR54 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rif1Q6PR54 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.38■□□□□ 0.37
Rif1Q6PR54 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Rif1Q6PR54 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.38■□□□□ 0.37
Rif1Q6PR54 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rif1Q6PR54 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rif1Q6PR54 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rif1Q6PR54 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rif1Q6PR54 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rif1Q6PR54 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rif1Q6PR54 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rif1Q6PR54 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rif1Q6PR54 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rif1Q6PR54 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rif1Q6PR54 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.37■□□□□ 0.37
Rif1Q6PR54 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.37■□□□□ 0.37
Rif1Q6PR54 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rif1Q6PR54 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rif1Q6PR54 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.35■□□□□ 0.37
Rif1Q6PR54 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Rif1Q6PR54 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Rif1Q6PR54 Reep4-203ENSMUST00000226563 1444 ntBASIC17.35■□□□□ 0.37
Rif1Q6PR54 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rif1Q6PR54 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.35■□□□□ 0.37
Rif1Q6PR54 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rif1Q6PR54 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rif1Q6PR54 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rif1Q6PR54 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Rif1Q6PR54 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 116.1 ms