Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Chd4Q6PDQ2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Chd4Q6PDQ2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Chd4Q6PDQ2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Chd4Q6PDQ2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC27.28■■□□□ 1.96
Chd4Q6PDQ2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Chd4Q6PDQ2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Chd4Q6PDQ2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Chd4Q6PDQ2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Chd4Q6PDQ2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
Chd4Q6PDQ2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Chd4Q6PDQ2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Chd4Q6PDQ2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Chd4Q6PDQ2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Chd4Q6PDQ2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Chd4Q6PDQ2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Chd4Q6PDQ2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC27.26■■□□□ 1.95
Chd4Q6PDQ2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Chd4Q6PDQ2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
Chd4Q6PDQ2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Chd4Q6PDQ2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Chd4Q6PDQ2 Gm43403-201ENSMUST00000198011 1786 ntBASIC27.25■■□□□ 1.95
Chd4Q6PDQ2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC27.25■■□□□ 1.95
Chd4Q6PDQ2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC27.25■■□□□ 1.95
Chd4Q6PDQ2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
Chd4Q6PDQ2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Chd4Q6PDQ2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Chd4Q6PDQ2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Chd4Q6PDQ2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Chd4Q6PDQ2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Chd4Q6PDQ2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Chd4Q6PDQ2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC27.24■■□□□ 1.95
Chd4Q6PDQ2 Gm10493-201ENSMUST00000097270 612 ntBASIC27.24■■□□□ 1.95
Chd4Q6PDQ2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Chd4Q6PDQ2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
Chd4Q6PDQ2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
Chd4Q6PDQ2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Chd4Q6PDQ2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Chd4Q6PDQ2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Chd4Q6PDQ2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Chd4Q6PDQ2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC27.23■■□□□ 1.95
Chd4Q6PDQ2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Chd4Q6PDQ2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Chd4Q6PDQ2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Chd4Q6PDQ2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Chd4Q6PDQ2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Chd4Q6PDQ2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Chd4Q6PDQ2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Chd4Q6PDQ2 Gm40848-201ENSMUST00000221998 324 ntBASIC27.22■■□□□ 1.95
Chd4Q6PDQ2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Chd4Q6PDQ2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
Chd4Q6PDQ2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC27.22■■□□□ 1.95
Chd4Q6PDQ2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Chd4Q6PDQ2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Chd4Q6PDQ2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Chd4Q6PDQ2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
Chd4Q6PDQ2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC27.21■■□□□ 1.95
Chd4Q6PDQ2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Chd4Q6PDQ2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Chd4Q6PDQ2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
Chd4Q6PDQ2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC27.2■■□□□ 1.95
Chd4Q6PDQ2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
Chd4Q6PDQ2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Chd4Q6PDQ2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Chd4Q6PDQ2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC27.2■■□□□ 1.94
Chd4Q6PDQ2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Chd4Q6PDQ2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
Chd4Q6PDQ2 Gm10129-202ENSMUST00000193100 1316 ntBASIC27.2■■□□□ 1.94
Chd4Q6PDQ2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC27.2■■□□□ 1.94
Chd4Q6PDQ2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Chd4Q6PDQ2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
Chd4Q6PDQ2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Chd4Q6PDQ2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Chd4Q6PDQ2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC27.18■■□□□ 1.94
Chd4Q6PDQ2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Chd4Q6PDQ2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC27.18■■□□□ 1.94
Chd4Q6PDQ2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Chd4Q6PDQ2 Smad6-203ENSMUST00000179458 273 ntBASIC27.18■■□□□ 1.94
Chd4Q6PDQ2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC27.18■■□□□ 1.94
Chd4Q6PDQ2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
Chd4Q6PDQ2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Chd4Q6PDQ2 Gm27045-201ENSMUST00000182145 1402 ntBASIC27.17■■□□□ 1.94
Chd4Q6PDQ2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Chd4Q6PDQ2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Chd4Q6PDQ2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Chd4Q6PDQ2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Chd4Q6PDQ2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Chd4Q6PDQ2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
Chd4Q6PDQ2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC27.16■■□□□ 1.94
Chd4Q6PDQ2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC27.16■■□□□ 1.94
Chd4Q6PDQ2 Gm10209-201ENSMUST00000203397 1607 ntBASIC27.16■■□□□ 1.94
Chd4Q6PDQ2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
Chd4Q6PDQ2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC27.15■■□□□ 1.94
Chd4Q6PDQ2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC27.15■■□□□ 1.94
Chd4Q6PDQ2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Chd4Q6PDQ2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
Chd4Q6PDQ2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Chd4Q6PDQ2 Gm5874-201ENSMUST00000096101 508 ntBASIC27.14■■□□□ 1.93
Chd4Q6PDQ2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Chd4Q6PDQ2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms