Protein–RNA interactions for Protein: Q6PDC0

Rundc3b, RUN domain-containing protein 3B, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rundc3bQ6PDC0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Rundc3bQ6PDC0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rundc3bQ6PDC0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rundc3bQ6PDC0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rundc3bQ6PDC0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rundc3bQ6PDC0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rundc3bQ6PDC0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Rundc3bQ6PDC0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rundc3bQ6PDC0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rundc3bQ6PDC0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rundc3bQ6PDC0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rundc3bQ6PDC0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rundc3bQ6PDC0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rundc3bQ6PDC0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.21■□□□□ 0.67
Rundc3bQ6PDC0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Rundc3bQ6PDC0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rundc3bQ6PDC0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rundc3bQ6PDC0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rundc3bQ6PDC0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rundc3bQ6PDC0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rundc3bQ6PDC0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.21■□□□□ 0.67
Rundc3bQ6PDC0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rundc3bQ6PDC0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rundc3bQ6PDC0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rundc3bQ6PDC0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rundc3bQ6PDC0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rundc3bQ6PDC0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Rundc3bQ6PDC0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rundc3bQ6PDC0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rundc3bQ6PDC0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rundc3bQ6PDC0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rundc3bQ6PDC0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Rundc3bQ6PDC0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rundc3bQ6PDC0 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.2■□□□□ 0.66
Rundc3bQ6PDC0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.2■□□□□ 0.66
Rundc3bQ6PDC0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rundc3bQ6PDC0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rundc3bQ6PDC0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.19■□□□□ 0.66
Rundc3bQ6PDC0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rundc3bQ6PDC0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rundc3bQ6PDC0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rundc3bQ6PDC0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rundc3bQ6PDC0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rundc3bQ6PDC0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rundc3bQ6PDC0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rundc3bQ6PDC0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rundc3bQ6PDC0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rundc3bQ6PDC0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rundc3bQ6PDC0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rundc3bQ6PDC0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rundc3bQ6PDC0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.18■□□□□ 0.66
Rundc3bQ6PDC0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rundc3bQ6PDC0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rundc3bQ6PDC0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Rundc3bQ6PDC0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rundc3bQ6PDC0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rundc3bQ6PDC0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rundc3bQ6PDC0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rundc3bQ6PDC0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rundc3bQ6PDC0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.17■□□□□ 0.66
Rundc3bQ6PDC0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rundc3bQ6PDC0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rundc3bQ6PDC0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rundc3bQ6PDC0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rundc3bQ6PDC0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rundc3bQ6PDC0 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.17■□□□□ 0.66
Rundc3bQ6PDC0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rundc3bQ6PDC0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Rundc3bQ6PDC0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rundc3bQ6PDC0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.16■□□□□ 0.66
Rundc3bQ6PDC0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rundc3bQ6PDC0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.16■□□□□ 0.66
Rundc3bQ6PDC0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rundc3bQ6PDC0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rundc3bQ6PDC0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rundc3bQ6PDC0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rundc3bQ6PDC0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.16■□□□□ 0.66
Rundc3bQ6PDC0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.16■□□□□ 0.66
Rundc3bQ6PDC0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rundc3bQ6PDC0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Rundc3bQ6PDC0 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rundc3bQ6PDC0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rundc3bQ6PDC0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rundc3bQ6PDC0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rundc3bQ6PDC0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rundc3bQ6PDC0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rundc3bQ6PDC0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rundc3bQ6PDC0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rundc3bQ6PDC0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.15■□□□□ 0.66
Rundc3bQ6PDC0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rundc3bQ6PDC0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rundc3bQ6PDC0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rundc3bQ6PDC0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rundc3bQ6PDC0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rundc3bQ6PDC0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rundc3bQ6PDC0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.14■□□□□ 0.66
Rundc3bQ6PDC0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Rundc3bQ6PDC0 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.14■□□□□ 0.65
Rundc3bQ6PDC0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Rundc3bQ6PDC0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms