Protein–RNA interactions for Protein: Q61660

Foxj1, Forkhead box protein J1, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxj1Q61660 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Foxj1Q61660 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Foxj1Q61660 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Foxj1Q61660 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Foxj1Q61660 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Foxj1Q61660 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Foxj1Q61660 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.8■□□□□ 0.92
Foxj1Q61660 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Foxj1Q61660 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Foxj1Q61660 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Foxj1Q61660 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.8■□□□□ 0.92
Foxj1Q61660 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Foxj1Q61660 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Foxj1Q61660 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Foxj1Q61660 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Foxj1Q61660 Gm8493-201ENSMUST00000196881 489 ntBASIC20.79■□□□□ 0.92
Foxj1Q61660 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.79■□□□□ 0.92
Foxj1Q61660 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Foxj1Q61660 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Foxj1Q61660 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
Foxj1Q61660 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Foxj1Q61660 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Foxj1Q61660 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Foxj1Q61660 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Foxj1Q61660 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Foxj1Q61660 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Foxj1Q61660 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Foxj1Q61660 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.78■□□□□ 0.92
Foxj1Q61660 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Foxj1Q61660 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Foxj1Q61660 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Foxj1Q61660 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Foxj1Q61660 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Foxj1Q61660 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Foxj1Q61660 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Foxj1Q61660 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.77■□□□□ 0.92
Foxj1Q61660 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Foxj1Q61660 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
Foxj1Q61660 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Foxj1Q61660 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Foxj1Q61660 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Foxj1Q61660 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Foxj1Q61660 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Foxj1Q61660 Gm7143-201ENSMUST00000222811 859 ntBASIC20.76■□□□□ 0.91
Foxj1Q61660 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Foxj1Q61660 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Foxj1Q61660 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
Foxj1Q61660 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Foxj1Q61660 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.75■□□□□ 0.91
Foxj1Q61660 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Foxj1Q61660 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Foxj1Q61660 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Foxj1Q61660 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Foxj1Q61660 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Foxj1Q61660 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Foxj1Q61660 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.74■□□□□ 0.91
Foxj1Q61660 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.74■□□□□ 0.91
Foxj1Q61660 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.74■□□□□ 0.91
Foxj1Q61660 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.74■□□□□ 0.91
Foxj1Q61660 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Foxj1Q61660 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Foxj1Q61660 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Foxj1Q61660 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Foxj1Q61660 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.73■□□□□ 0.91
Foxj1Q61660 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.73■□□□□ 0.91
Foxj1Q61660 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Foxj1Q61660 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Foxj1Q61660 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.72■□□□□ 0.91
Foxj1Q61660 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.72■□□□□ 0.91
Foxj1Q61660 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Foxj1Q61660 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.72■□□□□ 0.91
Foxj1Q61660 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Foxj1Q61660 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.72■□□□□ 0.91
Foxj1Q61660 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Foxj1Q61660 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Foxj1Q61660 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.71■□□□□ 0.91
Foxj1Q61660 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Foxj1Q61660 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Foxj1Q61660 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Foxj1Q61660 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Foxj1Q61660 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Foxj1Q61660 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Foxj1Q61660 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Foxj1Q61660 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Foxj1Q61660 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Foxj1Q61660 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Foxj1Q61660 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Foxj1Q61660 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Foxj1Q61660 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.7■□□□□ 0.9
Foxj1Q61660 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.7■□□□□ 0.9
Foxj1Q61660 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Foxj1Q61660 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Foxj1Q61660 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Foxj1Q61660 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Foxj1Q61660 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.7■□□□□ 0.9
Foxj1Q61660 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Foxj1Q61660 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Foxj1Q61660 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Foxj1Q61660 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Foxj1Q61660 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms