Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn2bQ56A07 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn2bQ56A07 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.22■□□□□ 0.83
Scn2bQ56A07 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
Scn2bQ56A07 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn2bQ56A07 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.22■□□□□ 0.83
Scn2bQ56A07 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn2bQ56A07 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scn2bQ56A07 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Scn2bQ56A07 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn2bQ56A07 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.21■□□□□ 0.83
Scn2bQ56A07 Gm5812-201ENSMUST00000061073 957 ntBASIC20.21■□□□□ 0.83
Scn2bQ56A07 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Scn2bQ56A07 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn2bQ56A07 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Scn2bQ56A07 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn2bQ56A07 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Scn2bQ56A07 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn2bQ56A07 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Scn2bQ56A07 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn2bQ56A07 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Scn2bQ56A07 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Scn2bQ56A07 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Scn2bQ56A07 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.2■□□□□ 0.82
Scn2bQ56A07 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn2bQ56A07 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn2bQ56A07 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.2■□□□□ 0.82
Scn2bQ56A07 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Scn2bQ56A07 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn2bQ56A07 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn2bQ56A07 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn2bQ56A07 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.19■□□□□ 0.82
Scn2bQ56A07 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.19■□□□□ 0.82
Scn2bQ56A07 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn2bQ56A07 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn2bQ56A07 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn2bQ56A07 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.18■□□□□ 0.82
Scn2bQ56A07 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scn2bQ56A07 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Scn2bQ56A07 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.18■□□□□ 0.82
Scn2bQ56A07 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Scn2bQ56A07 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Scn2bQ56A07 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn2bQ56A07 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.18■□□□□ 0.82
Scn2bQ56A07 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn2bQ56A07 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn2bQ56A07 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Scn2bQ56A07 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn2bQ56A07 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn2bQ56A07 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Scn2bQ56A07 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Scn2bQ56A07 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn2bQ56A07 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Scn2bQ56A07 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.17■□□□□ 0.82
Scn2bQ56A07 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.17■□□□□ 0.82
Scn2bQ56A07 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn2bQ56A07 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn2bQ56A07 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Scn2bQ56A07 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn2bQ56A07 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Scn2bQ56A07 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn2bQ56A07 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn2bQ56A07 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn2bQ56A07 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn2bQ56A07 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn2bQ56A07 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.16■□□□□ 0.82
Scn2bQ56A07 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn2bQ56A07 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Scn2bQ56A07 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn2bQ56A07 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn2bQ56A07 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn2bQ56A07 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Scn2bQ56A07 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Scn2bQ56A07 Gm15546-201ENSMUST00000122095 826 ntBASIC20.15■□□□□ 0.82
Scn2bQ56A07 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn2bQ56A07 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.15■□□□□ 0.82
Scn2bQ56A07 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn2bQ56A07 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn2bQ56A07 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn2bQ56A07 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn2bQ56A07 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn2bQ56A07 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn2bQ56A07 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn2bQ56A07 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn2bQ56A07 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn2bQ56A07 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Scn2bQ56A07 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.82
Scn2bQ56A07 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Scn2bQ56A07 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn2bQ56A07 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn2bQ56A07 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn2bQ56A07 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Scn2bQ56A07 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn2bQ56A07 Gm15820-201ENSMUST00000201566 728 ntBASIC20.14■□□□□ 0.81
Scn2bQ56A07 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scn2bQ56A07 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Scn2bQ56A07 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.13■□□□□ 0.81
Scn2bQ56A07 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Scn2bQ56A07 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scn2bQ56A07 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms