Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cnga4Q3UW12 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Cnga4Q3UW12 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.74■□□□□ 0.91
Cnga4Q3UW12 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Cnga4Q3UW12 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cnga4Q3UW12 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cnga4Q3UW12 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Cnga4Q3UW12 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Cnga4Q3UW12 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cnga4Q3UW12 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Cnga4Q3UW12 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cnga4Q3UW12 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cnga4Q3UW12 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cnga4Q3UW12 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cnga4Q3UW12 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Cnga4Q3UW12 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cnga4Q3UW12 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cnga4Q3UW12 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cnga4Q3UW12 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cnga4Q3UW12 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cnga4Q3UW12 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cnga4Q3UW12 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cnga4Q3UW12 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cnga4Q3UW12 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cnga4Q3UW12 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cnga4Q3UW12 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Cnga4Q3UW12 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cnga4Q3UW12 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cnga4Q3UW12 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cnga4Q3UW12 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Cnga4Q3UW12 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cnga4Q3UW12 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cnga4Q3UW12 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cnga4Q3UW12 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cnga4Q3UW12 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cnga4Q3UW12 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cnga4Q3UW12 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cnga4Q3UW12 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cnga4Q3UW12 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cnga4Q3UW12 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cnga4Q3UW12 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cnga4Q3UW12 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cnga4Q3UW12 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cnga4Q3UW12 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cnga4Q3UW12 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cnga4Q3UW12 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cnga4Q3UW12 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cnga4Q3UW12 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cnga4Q3UW12 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cnga4Q3UW12 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cnga4Q3UW12 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cnga4Q3UW12 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cnga4Q3UW12 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cnga4Q3UW12 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cnga4Q3UW12 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.67■□□□□ 0.9
Cnga4Q3UW12 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cnga4Q3UW12 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Cnga4Q3UW12 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Cnga4Q3UW12 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cnga4Q3UW12 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.67■□□□□ 0.9
Cnga4Q3UW12 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cnga4Q3UW12 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cnga4Q3UW12 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cnga4Q3UW12 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cnga4Q3UW12 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cnga4Q3UW12 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cnga4Q3UW12 Gm11687-201ENSMUST00000118911 886 ntBASIC20.65■□□□□ 0.9
Cnga4Q3UW12 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.65■□□□□ 0.9
Cnga4Q3UW12 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cnga4Q3UW12 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Cnga4Q3UW12 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cnga4Q3UW12 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cnga4Q3UW12 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cnga4Q3UW12 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cnga4Q3UW12 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cnga4Q3UW12 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cnga4Q3UW12 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.64■□□□□ 0.9
Cnga4Q3UW12 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cnga4Q3UW12 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cnga4Q3UW12 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cnga4Q3UW12 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Cnga4Q3UW12 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cnga4Q3UW12 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cnga4Q3UW12 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cnga4Q3UW12 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.63■□□□□ 0.89
Cnga4Q3UW12 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cnga4Q3UW12 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.63■□□□□ 0.89
Cnga4Q3UW12 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cnga4Q3UW12 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cnga4Q3UW12 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cnga4Q3UW12 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Cnga4Q3UW12 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.63■□□□□ 0.89
Cnga4Q3UW12 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cnga4Q3UW12 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cnga4Q3UW12 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cnga4Q3UW12 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
Cnga4Q3UW12 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cnga4Q3UW12 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cnga4Q3UW12 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.62■□□□□ 0.89
Cnga4Q3UW12 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms