Protein–RNA interactions for Protein: Q3U2K5

Kdm4d, Lysine-specific demethylase 4D, mousemouse

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm4dQ3U2K5 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Kdm4dQ3U2K5 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Kdm4dQ3U2K5 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Kdm4dQ3U2K5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
Kdm4dQ3U2K5 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Kdm4dQ3U2K5 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Kdm4dQ3U2K5 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Kdm4dQ3U2K5 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Kdm4dQ3U2K5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Kdm4dQ3U2K5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.52■□□□□ 0.72
Kdm4dQ3U2K5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Kdm4dQ3U2K5 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Kdm4dQ3U2K5 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Kdm4dQ3U2K5 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Kdm4dQ3U2K5 Gm43137-201ENSMUST00000198052 594 ntBASIC19.52■□□□□ 0.72
Kdm4dQ3U2K5 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Kdm4dQ3U2K5 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Kdm4dQ3U2K5 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Kdm4dQ3U2K5 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Kdm4dQ3U2K5 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Kdm4dQ3U2K5 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Kdm4dQ3U2K5 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Kdm4dQ3U2K5 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Kdm4dQ3U2K5 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Kdm4dQ3U2K5 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Kdm4dQ3U2K5 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Kdm4dQ3U2K5 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Kdm4dQ3U2K5 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Kdm4dQ3U2K5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Kdm4dQ3U2K5 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Kdm4dQ3U2K5 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Kdm4dQ3U2K5 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Kdm4dQ3U2K5 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Kdm4dQ3U2K5 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Kdm4dQ3U2K5 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.5■□□□□ 0.71
Kdm4dQ3U2K5 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Kdm4dQ3U2K5 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.5■□□□□ 0.71
Kdm4dQ3U2K5 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.5■□□□□ 0.71
Kdm4dQ3U2K5 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.5■□□□□ 0.71
Kdm4dQ3U2K5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Kdm4dQ3U2K5 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Kdm4dQ3U2K5 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Kdm4dQ3U2K5 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Kdm4dQ3U2K5 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Kdm4dQ3U2K5 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Kdm4dQ3U2K5 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Kdm4dQ3U2K5 Gm6139-201ENSMUST00000079261 882 ntBASIC19.49■□□□□ 0.71
Kdm4dQ3U2K5 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Kdm4dQ3U2K5 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Kdm4dQ3U2K5 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Kdm4dQ3U2K5 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Kdm4dQ3U2K5 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Kdm4dQ3U2K5 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Kdm4dQ3U2K5 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Kdm4dQ3U2K5 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Kdm4dQ3U2K5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Kdm4dQ3U2K5 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Kdm4dQ3U2K5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Kdm4dQ3U2K5 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Kdm4dQ3U2K5 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.46■□□□□ 0.71
Kdm4dQ3U2K5 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Kdm4dQ3U2K5 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Kdm4dQ3U2K5 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Kdm4dQ3U2K5 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Kdm4dQ3U2K5 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Kdm4dQ3U2K5 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Kdm4dQ3U2K5 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Kdm4dQ3U2K5 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.46■□□□□ 0.71
Kdm4dQ3U2K5 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Kdm4dQ3U2K5 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Kdm4dQ3U2K5 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Kdm4dQ3U2K5 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.45■□□□□ 0.7
Kdm4dQ3U2K5 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.45■□□□□ 0.7
Kdm4dQ3U2K5 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Kdm4dQ3U2K5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Kdm4dQ3U2K5 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Kdm4dQ3U2K5 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Kdm4dQ3U2K5 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Kdm4dQ3U2K5 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Kdm4dQ3U2K5 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Kdm4dQ3U2K5 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Kdm4dQ3U2K5 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Kdm4dQ3U2K5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Kdm4dQ3U2K5 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Kdm4dQ3U2K5 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Kdm4dQ3U2K5 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Kdm4dQ3U2K5 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Kdm4dQ3U2K5 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.43■□□□□ 0.7
Kdm4dQ3U2K5 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Kdm4dQ3U2K5 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Kdm4dQ3U2K5 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Kdm4dQ3U2K5 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.42■□□□□ 0.7
Kdm4dQ3U2K5 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Kdm4dQ3U2K5 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.42■□□□□ 0.7
Kdm4dQ3U2K5 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Kdm4dQ3U2K5 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.42■□□□□ 0.7
Kdm4dQ3U2K5 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Kdm4dQ3U2K5 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Kdm4dQ3U2K5 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Kdm4dQ3U2K5 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms