Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
SgcbP82349 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SgcbP82349 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SgcbP82349 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SgcbP82349 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SgcbP82349 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SgcbP82349 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SgcbP82349 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SgcbP82349 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SgcbP82349 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SgcbP82349 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SgcbP82349 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SgcbP82349 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.19■□□□□ 0.5
SgcbP82349 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SgcbP82349 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SgcbP82349 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.18■□□□□ 0.5
SgcbP82349 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SgcbP82349 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SgcbP82349 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SgcbP82349 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SgcbP82349 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.18■□□□□ 0.5
SgcbP82349 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SgcbP82349 Gm7143-201ENSMUST00000222811 859 ntBASIC18.18■□□□□ 0.5
SgcbP82349 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SgcbP82349 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.18■□□□□ 0.5
SgcbP82349 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SgcbP82349 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
SgcbP82349 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SgcbP82349 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.17■□□□□ 0.5
SgcbP82349 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
SgcbP82349 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SgcbP82349 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SgcbP82349 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SgcbP82349 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SgcbP82349 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SgcbP82349 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SgcbP82349 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
SgcbP82349 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SgcbP82349 Gm12922-201ENSMUST00000120626 809 ntBASIC18.16■□□□□ 0.5
SgcbP82349 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SgcbP82349 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SgcbP82349 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SgcbP82349 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
SgcbP82349 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
SgcbP82349 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SgcbP82349 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
SgcbP82349 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SgcbP82349 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SgcbP82349 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SgcbP82349 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.15■□□□□ 0.5
SgcbP82349 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SgcbP82349 Gm13241-201ENSMUST00000094493 780 ntBASIC18.15■□□□□ 0.5
SgcbP82349 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SgcbP82349 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.15■□□□□ 0.5
SgcbP82349 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SgcbP82349 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SgcbP82349 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.14■□□□□ 0.49
SgcbP82349 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SgcbP82349 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.14■□□□□ 0.49
SgcbP82349 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SgcbP82349 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SgcbP82349 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SgcbP82349 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SgcbP82349 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SgcbP82349 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.13■□□□□ 0.49
SgcbP82349 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.13■□□□□ 0.49
SgcbP82349 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SgcbP82349 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.13■□□□□ 0.49
SgcbP82349 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SgcbP82349 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SgcbP82349 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SgcbP82349 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SgcbP82349 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SgcbP82349 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SgcbP82349 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SgcbP82349 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SgcbP82349 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SgcbP82349 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SgcbP82349 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.12■□□□□ 0.49
SgcbP82349 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SgcbP82349 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.12■□□□□ 0.49
SgcbP82349 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SgcbP82349 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SgcbP82349 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SgcbP82349 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.12■□□□□ 0.49
SgcbP82349 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SgcbP82349 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.12■□□□□ 0.49
SgcbP82349 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.12■□□□□ 0.49
SgcbP82349 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SgcbP82349 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SgcbP82349 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.11■□□□□ 0.49
SgcbP82349 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SgcbP82349 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.11■□□□□ 0.49
SgcbP82349 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.11■□□□□ 0.49
SgcbP82349 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.11■□□□□ 0.49
SgcbP82349 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SgcbP82349 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SgcbP82349 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SgcbP82349 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SgcbP82349 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms